Related by context. All words. (Click for frequent words.) 64 Salmonella enterica 63 Bifidobacterium longum 62 epidermidis 62 Phylogenetic analysis 61 Propionibacterium 61 coagulase negative staphylococci 61 Enterococcus faecium 61 Staphylococcus epidermidis 61 B. longum 61 Cytochrome 61 Trichophyton rubrum 60 Escherichia 60 ESBL producing 60 thymidine kinase 60 denaturing gradient gel electrophoresis 60 subtilis 60 enteroviral 59 Enterococcus faecalis 59 lactamases 59 K. pneumoniae 59 Corynebacterium 59 #S rDNA 59 #S rRNA 59 serovar 59 Haemophilus 59 Enterobacter cloacae 59 Virulence 59 Immunohistochemical 59 carbapenemase 59 Neisseria gonorrhoeae 59 haemagglutinin 59 linezolid resistant 59 bifidum 59 Enterococci 59 E. faecium 59 methicillin susceptible Staphylococcus aureus 59 Infectivity 59 Enterobacteriaceae 58 RFLP 58 #S rRNA gene 58 E. faecalis 58 Moraxella catarrhalis 58 avium 58 typhi 58 PCR assay 58 Clostridium perfringens 58 genes differentially expressed 58 Clinical Isolates 58 S. enterica 58 glycopeptide 58 Alkaline Phosphatase 58 multiresistant 58 ß lactamase 58 Leptospira 58 Mycobacterium smegmatis 58 Porphyromonas gingivalis 58 probiotic Lactobacillus 58 S. typhi 58 aeruginosa 57 faecalis 57 Giardia lamblia 57 Treponema pallidum 57 sulfonamide 57 cocci 57 sakazakii 57 Typhimurium 57 C. jejuni 57 dermatophytes 57 Streptococcus pyogenes 57 staphylococci 57 Genotypic 57 Nocardia 57 A. niger 57 enterococcal 57 Klebsiella pneumoniae 57 lipopolysaccharide LPS 57 fluconazole resistant 57 vivax 57 H. Pylori 57 Methicillin Resistant 57 Pasteurella multocida 57 methicillin sensitive 57 esterase 57 Prevotella 57 Trypanosoma 57 opportunistic pathogen 57 PI3 57 Vibrio parahaemolyticus 57 Bacillus 57 Eukaryotic 57 Immunoassay System 57 obligate intracellular 57 S aureus 57 Escherichia coli Klebsiella pneumoniae 57 Polymorphism 57 Bacillus species 57 Aspergillus niger 57 causative organism 57 bacterium Bacillus 56 Escherichia coli O# 56 pneumoniae 56 H. influenzae 56 L. pneumophila 56 Staphylococci 56 reaction PCR 56 Mutation Detection 56 Phenotypic 56 Anopheles gambiae 56 Protease 56 ortholog 56 Streptococcus agalactiae 56 Pseudomonas putida 56 Highly Pathogenic 56 Rickettsia 56 pyogenes 56 Pathogenic 56 Trypanosoma cruzi 56 bacteria Escherichia coli 56 influenzae 56 PCR RFLP 56 bacilli 56 P. ovale 56 vancomycin resistant 56 dermatophyte 56 glucosidase 56 metagenome 56 Mycobacterium 56 Trichoderma 56 Rhizobium 56 amine oxidase 56 Inactivation 56 outer membrane proteins 56 Trichophyton 56 Campylobacter jejuni 56 quinolone resistant 56 bacteria Pseudomonas 56 Trichomonas 56 IgG antibody 56 Enteritidis 56 Plasmodium vivax 56 HBV genotype 56 Aeromonas 56 israelensis 56 Entamoeba histolytica 56 Burkholderia pseudomallei 56 Mutagenesis 56 C. trachomatis 56 mutans 56 fluoroquinolone resistant 56 BRSV 56 Saccharomyces 56 vaginalis 56 bacterium Mycobacterium 56 LightCycler ® 55 Aspergillus 55 Polymorphisms 55 2n = 55 T. brucei 55 pathogenic bacterium 55 Lactobacillus rhamnosus 55 Haemophilus influenzae Moraxella catarrhalis 55 cytidine 55 cepacia 55 PFGE 55 cell lysates 55 Enterobacter 55 agarose gel electrophoresis 55 Detection Kit 55 beta lactamases 55 supernatants 55 Borrelia burgdorferi 55 S. typhimurium 55 faecium 55 Transcriptome 55 DGGE 55 transcriptomic 55 assay detects 55 albicans 55 immunoblotting 55 Antibiotic resistant 55 Salmonella spp 55 bacillary 55 MDRSP 55 Beta lactamase 55 Replikin 55 oxacillin 55 immunostaining 55 Bacteremia 55 enterobacteriaceae 55 methyltransferase 55 FMDV 55 virulence genes 55 Biosynthesis 55 Escherichia coli E. coli 55 paratuberculosis 55 Histopathologic 55 MALDI TOF MS 55 Bacillus coagulans 55 monocytogenes 55 N. gonorrhoeae 55 Salmonella enterica serovar 55 Y. pestis 55 methicillin resistant MRSA 55 GenBank accession 55 replicase 55 Propionibacterium acnes 54 toxigenic strains 54 reagent kit 54 RT PCR assay 54 S. Typhimurium 54 ABL1 54 immitis 54 Klebsiella pneumonia 54 p# antigen 54 B. cereus 54 mM NaCl 54 vesicular stomatitis virus 54 β1 54 P. malariae 54 Cryptosporidium parvum 54 lactis 54 Schistosoma mansoni 54 induced sputum 54 Serological 54 Mycobacterium leprae 54 Legionella pneumophila 54 ESBLs 54 Bacillus subtilis 54 Neisseria meningitidis 54 bacterial pathogen 54 carbapenem resistant 54 Mycobacterium bovis 54 C#BL/#J 54 Supplemental Figure 54 Mycoplasma pneumoniae 54 bronchial epithelial cells 54 bacterial genomes 54 NS1 54 hydrolase 54 quasispecies 54 coagulase negative 54 hemagglutination 54 Bifidobacterium infantis 54 immunofluorescent 54 vibrio cholerae 54 hominis 54 Enterococcus faecalis vancomycin susceptible 54 subcellular localization 54 Pathogenicity 54 PCR primers 54 Ribosomal 54 Streptomyces 54 B. cepacia 54 Escherichia Coli 54 polymicrobial 54 Treponema 54 electron micrograph 54 bactericidal activity 54 alpha hemolysin 54 nasopharyngeal swabs 54 Figure 1A 54 Chlamydia trachomatis 54 Sulfolobus 54 Cepheid Xpert 54 Trypanosoma brucei 54 Candida glabrata 54 subtyping 54 Babesia 54 Mycobacteria 54 titres 54 S. cerevisiae 54 fig. S2 53 #S rRNA genes 53 Nasopharyngeal 53 trypanosome 53 RT qPCR 53 cell lysate 53 Streptococcal 53 malayi 53 cefotaxime 53 spore forming bacteria 53 Vitro Activity 53 Escherichia coli 53 C. burnetii 53 Clostridia 53 bacterium Chlamydia trachomatis 53 QRT PCR 53 MRSA Clostridium difficile 53 endonuclease 53 Lactobacillus plantarum 53 scanning electron micrograph 53 V. cholerae 53 replicon 53 carboxyl terminal 53 allyl 53 Salmonella typhi 53 C#T [002] 53 pestis 53 pylori 53 Quantitation 53 gambiae 53 Virus Infection 53 filarial worms 53 lysine residues 53 Enterobacter sakazakii 53 hemagglutinin gene 53 virions 53 jejuni 53 PRRSV 53 Histoplasma capsulatum 53 shiga toxin 53 Coxiella burnetii 53 plasmodium 53 gDNA 53 PCR amplified 53 spirochete 53 ribosomal protein 53 mRNA transcripts 53 Attenuated 53 Staphylococcus bacteria 53 DHPLC 53 murine leukemia virus 53 Multidrug resistant 53 Bifidobacterium lactis 53 Western blotting 53 Escherichia coli bacteria 53 M. leprae 53 fast bacilli 53 bronchoalveolar lavage 53 Candida species 53 phosphorylase 53 intracellular pathogen 53 antibiotic susceptibility 53 heterologous expression 53 D#N 53 vancomycin resistant enterococcus 53 Trichomonas vaginalis 53 Vancomycin resistant 53 P aeruginosa 53 Hemagglutinin 52 transcriptional profiling 52 pathogenic E. coli 52 TUNEL 52 Energy Dispersive X ray 52 Panton Valentine leukocidin 52 Chlamydia trachomatis CT 52 reverse transcriptase polymerase chain 52 Poliovirus 52 Staphylococcal 52 Lactobacillus reuteri 52 Neisseria 52 respiratory syndrome virus 52 Staphylococcus 52 Clostridium 52 Phenotypes 52 hematoxylin eosin 52 resistant Staphylococcus 52 transcriptome sequencing 52 Chemokine Receptor 52 pneumoniae PRSP 52 Lassa virus 52 MRSA isolates 52 acid phosphatase 52 Bacteriophage 52 Anisakis 52 drug resistant Streptococcus 52 trimer 52 Staphylococcus aureus methicillin susceptible 52 QPCR 52 Deinococcus 52 Methicillin Resistant Staphylococcus aureus 52 sequenced genomes 52 Oncogenic 52 fig. S6 52 VRSA 52 S. intermedius 52 NS1 protein 52 polyomavirus 52 genomic sequence 52 Anaplasma 52 Adenovirus 52 nonpathogenic 52 Fig. 2b 52 ESBL 52 human metapneumovirus 52 Phenylalanine 52 IgG4 52 Reductase 52 Agrobacterium 52 Borrelia 52 fluorescently labeled 52 etiologic agent 52 Taenia 52 airway epithelial 52 T. pallidum 52 ant genomes 52 archaeal 52 transcriptome analysis 52 Bartonella 52 Histone 52 aureus bacteria 52 enterotoxin 52 Apolipoprotein 52 transmission electron micrograph 52 Monoclonal 52 metagenomes 52 Fig. 3b 52 neomycin 52 homozygote 52 fig. S3 52 endospores 52 vancomycin intermediate 52 fig. S1 52 Extracellular 52 Candida albicans 52 flavivirus 52 hematoxylin 52 transferase 52 Adenoviral 52 Methicillin resistant 52 microsatellite markers 52 antiseptic chlorhexidine 52 F. tularensis 52 operon 52 methicillin resistant 52 Lymphoid 52 Plasmid DNA 52 phospholipase 52 serologically 52 L. rhamnosus 51 paramyxoviruses 51 amebiasis 51 Transmission Electron Microscopy 51 Immunofluorescence 51 T. rubrum 51 tissue transglutaminase 51 nonbacterial 51 includes S. anginosus 51 Proteobacteria 51 reassortant 51 Gram Positive 51 Salmonella Shigella 51 plague bacterium Yersinia 51 RNA extraction 51 spermine 51 Bifidobacterium bifidum 51 Subtype 51 Protein Expression 51 Gram Negative 51 adeno 51 proteomic analyzes 51 MRSA methicillin resistant 51 orthologs 51 cDNA libraries 51 affinity purification 51 GABHS 51 proviral 51 ectodomain 51 defensin 51 E. coli STEC 51 Antigens 51 #degreesC 51 MRSA Methicillin 51 IgA antibodies 51 Coronavirus 51 streptococci 51 cytochrome 51 Aspergillus nidulans 51 DNA Polymerase 51 immunoblot 51 ribosomal DNA 51 transcriptome profiling 51 capsid protein 51 Histologic 51 lysates 51 cytochrome b 51 Serotype 51 K#N 51 Francisella tularensis 51 Vesivirus 51 intracellular bacteria 51 Dehalococcoides 51 gadolinium Gd 51 amino terminal 51 bacteria Lactobacillus 51 carboxy terminal 51 immunofluorescence 51 neisseria 51 bacterium Streptococcus 51 deoxy 51 kDa protein 51 Trichophyton mentagrophytes 51 NS3 protease 51 Metapneumovirus 51 inactivate viruses 51 Situ Hybridization 51 hMPV 51 haemolytic 51 recombinantly 51 bacterium Escherichia coli 51 immunohistochemistry IHC 51 cryptococcosis 51 lactamase 51 Linezolid 51 Ralstonia 51 Mass Spectrometry MS 51 mycobacterium tuberculosis 51 RefSeq 51 C. neoformans 51 urease 51 B. subtilis 51 genus Plasmodium 51 ultrastructure 51 sequenced genome 51 S. aureus strains 51 Polymerase 51 Streptococci 51 E. coli O# [001] 51 Brucella abortus 51 L. acidophilus 51 liquid chromatography tandem 51 streptococcal 51 Panton Valentine Leukocidin 51 sulfonic acid 51 ELISA assay 51 zearalenone 51 AmpliChip 51 Tetrahymena 51 Staphylococcus aureus MSSA 51 protonated 51 cruzi 51 quantitative PCR 51 Pneumocystis 50 enolase 50 homologue 50 Vibrio cholera 50 viral nucleic acids 50 Antigenic 50 S. pyogenes 50 suis 50 V. parahaemolyticus 50 Cytogenetic 50 Haemophilus influenzae 50 NRTI resistance 50 C. difficile toxins 50 provirus 50 H pylori 50 ciliated 50 serogroup 50 serogroup B 50 Varicella zoster 50 arenaviruses 50 immunohistochemical analysis 50 Trichinella 50 mammalian fatty acid 50 Ascaris 50 mediastinitis 50 beta lactams 50 Vancomycin Resistant 50 secretory proteins 50 resistant Staphylococcus aureus MRSA 50 Cryptococcus 50 spongiform 50 isotope dilution 50 murine model 50 Sequence Database 50 Synechococcus 50 Glycoprotein 50 anaerobic bacterium 50 Parainfluenza 50 Erythema 50 C#BL 6 50 Hepatitis B Virus 50 mycobacterial 50 bronchoalveolar 50 Staphylococcus aureus MRSA 50 X4 tropic 50 exonuclease 50 Stenotrophomonas maltophilia 50 Immunohistochemical staining 50 molecular pathogenesis 50 Integrase 50 gonorrhoeae 50 efflux pump 50 deaminase 50 Necrotic 50 RNA polymerases 50 Varicella zoster virus 50 hemolytic 50 BAC clones 50 polyclonal 50 Ehrlichia 50 quantitative trait loci 50 Cutaneous 50 asiatica 50 Chlamydophila pneumoniae 50 histidine 50 kBq 50 arboviruses 50 viral isolates 50 causative agents 50 sequence homology 50 Spectrometry 50 penicillin resistant Streptococcus 50 nucleotide sequences 50 erythromycin resistant 50 Cysteine 50 parahaemolyticus 50 tularensis 50 beta lactamase 50 hVISA 50 Streptococcus pneumoniae Haemophilus influenzae 50 S. constellatus 50 MALDI TOF 50 mupirocin 50 Fig. 1c 50 Respiratory Virus 50 SARS CoV 50 Human Leukocyte Antigen 50 calprotectin 50 rotaviruses 50 Fig. 4a 50 vancomycin resistant enterococci 50 Isotopic 50 hemagglutinin H 50 Lactobacillus casei 50 Quantitative PCR 50 nested PCR 50 Fig.1 50 bacteria Staphylococcus aureus 50 JEV 50 Flavivirus 50 Nanobacteria 50 μM 50 Pseudomonas bacteria 50 quantitative reverse transcriptase 50 Keratitis 50 gastric adenocarcinoma 50 diethyl 50 Polymerase Chain Reaction 50 Fig. 2a 50 plasminogen activator 50 Crystallographic 49 PCR Assay 49 Mycoplasma genitalium 49 Photorhabdus 49 proteomic analysis 49 GPI anchored 49 differential gene expression 49 Epstein Barr Virus EBV 49 sulfadiazine 49 Subunit 49 Protein Interactions 49 virus HBV 49 leptospira 49 S.aureus 49 mediated inhibition 49 gel electrophoresis 49 Artsimovitch 49 brucella 49 Burkholderia 49 rickettsial 49 ChIP seq 49 protein tyrosine phosphatase 49 filoviruses 49 # mN 49 flow cytometric 49 preferentially binds 49 cagA 49 plasmodium falciparum 49 comparative genomic analysis 49 Vibrio cholerae 49 fluoroquinolone resistance 49 dual tropic 49 Mycobacterial 49 Epstein Barr virus EBV 49 Immunohistochemistry 49 dimensional electrophoresis 49 thermophilum 49 proteins nucleic acids 49 Assay Kits 49 LRTI 49 pneumococci 49 BACTERIA 49 endogenous retrovirus 49 Francisella 49 macromolecule 49 genital secretions 49 Herpes simplex virus 49 parainfluenza virus 49 Chlamydomonas reinhardtii 49 synthetases 49 guanidine 49 gag pol 49 gonococcal 49 Estrogen Receptor 49 vesicular 49 S. aureus MSSA 49 Histological 49 surface proteins hemagglutinin 49 acyltransferase 49 ORFs 49 V. vulnificus 49 FluChip 49 Annexin V 49 oligomeric 49 MOLECULAR 49 hematoxylin eosin original 49 urine dipstick 49 E. histolytica 49 Schematic representation 49 alphavirus 49 CHIKV 49 Haemophilus influenza 49 PCR assays 49 Illumina Solexa 49 falciparum 49 Pasteurella 49 oligonucleotide microarrays 49 Nosema ceranae 49 cDNA microarray 49 plastid 49 IgG IgM 49 clade C 49 replikin 49 P falciparum 49 transcriptomes 49 phospho 49 tetramer 49 tissue microarrays 49 BioKits 49 Viral RNA 49 attenuated strain 49 nucleotide substitutions 49 vulvovaginal candidiasis 49 vacuolar 49 Candida infection 49 proteinase 49 lysate 49 fungal genomes 49 macrolide resistant 49 lactams 49 polymyxin B 49 borane 49 FTIR spectrometer 49 Xenopus laevis 49 formamide 49 bacteraemia 49 enzymatically active 49 proctitis 49 immunoreactivity 49 carboxypeptidase 49 mutagenesis 49 acetyltransferase 49 Pneumoniae 49 FFPE tissue samples 49 MALDI MS 49 molecular diagnostic assay 49 immunomagnetic separation 49 Epitopes 49 Fig. 1b 49 Staphylococcus Aureus 49 rifamycins 49 homolog 49 NS#/#A protease 49 LC MALDI 49 herpesviruses 49 Influenza Virus 49 serum antibodies 49 NOD mouse 49 anthrax bacterium 49 Mg Ca 49 Mycobacterium tuberculosis MTB 49 Photochemistry 49 Resequencing 49 ankyrin repeat 49 NS3 49 hypervirulent strain 48 radioimmunoassay 48 Electrophysiological 48 ^ sup ^ 48 proteomes 48 angstrom resolution 48 Falciparum 48 Ultrasensitive 48 plasma proteome 48 MRSA VRE 48 PO4 48 Sindbis virus 48 #S ribosomal RNA 48 Pseudomonas syringae 48 ceftazidime 48 multiplex assay 48 Gas Chromatograph Mass Spectrometer 48 Yersinia pestis 48 Phospho 48 Leishmania donovani 48 B. henselae 48 magnesium Mg 48 Antitumor 48 micrograph 48 electron micrographs 48 anal intraepithelial neoplasia 48 gondii 48 κ 48 papular 48 multiplex PCR 48 δ 48 ,#,# [002] 48 bacterium Clostridium 48 deuterated 48 coxsackievirus 48 vancomycin resistant Staphylococcus aureus 48 powder diffraction 48 situ hybridisation 48 VP1 48 RRM1 48 glycolipid 48 amino acid residues 48 inactivated influenza 48 Acinetobacter baumannii 48 P. fluorescens 48 histopathologic examination 48 immunodominant 48 Analyte 48 histopathological 48 Mycoplasma 48 ultrastructural 48 Histopathological 48 nucleoprotein NP 48 Thermus aquaticus 48 Chlamydia pneumoniae 48 HIV1 48 Macrolide 48 Plasmodium ovale 48 Scanning electron micrograph 48 MMP# 48 Figure 1C 48 glycosyltransferase 48 immunohistochemical 48 mycobacterium 48 Bordetella pertussis 48 pleural fluid 48 isoenzyme 48 enterobacteria 48 Erythropoietic 48 astrocyte cells 48 Neisseria meningitides 48 chlamydial 48 ChIP Seq 48 CRISPR Cas 48 Human Papilloma 48 β galactosidase 48 quantitative RT PCR 48 clade B 48 Gentamicin 48 Mutation Analysis 48 Arabidopsis genome 48 qRT PCR 48 promoter methylation 48 micronucleus 48 Biofilm Formation 48 beta lactam 48 meningococcus 48 Telomere 48 Mycobacterium Tuberculosis 48 Molecular Diagnostic 48 phylogenetic analysis 48 Seeplex 48 5 hmC 48 pipiens 48 Ixodes 48 cytopathic 48 biopsy specimens 48 mitochondrial DNA mtDNA 48 type natriuretic peptide 48 difficile 48 helicobacter pylori 48 ionization mass spectrometry 48 directed mutagenesis 48 PrPSc 48 cholerae 48 staphylococcus aureus bacteria 48 Serologic 48 Immunohistochemical analysis 48 Situ Hybridization FISH 48 Hemorrhagic 48 GAPDH 48 malignant nodules 48 Toxoplasma gondii 48 immunofluorescence microscopy 48 Cytomegalovirus CMV 48 photomicrograph 48 coxsackie 48 HAAKE 48 resistant S. aureus 48 plantarum 48 Laboratoire de 48 hepatoma 48 Immunoassays 48 Single Nucleotide Polymorphisms SNPs 48 enteritis 48 Diarrheal 48 aCGH 48 ELISA assays 48 G#A [001] 48 antimicrobial susceptibility testing 48 Bacillus cereus 48 scanning electron microscopy SEM 48 alveolar epithelial cells 48 SMase 48 Healthcare Acquired Infections 48 T SPOT.TB 48 reaction RT PCR 48 Immunoglobulin G 48 Histology 48 Epitope 48 cDNA library 48 Allogeneic 48 T rubrum 48 bacterium Neisseria meningitidis 48 recombinant antibody 48 S. aureus isolates 48 Saccharomyces boulardii 48 VITEK ® 2 48 resistant organisms 48 Rickettsial 48 viral RNA 48 DNA Methylation 48 Transthyretin 48 biotinylated 48 genome annotation 48 cytoplasmic domain 48 neuraminidase NA 48 subcellular structures 48 Methionine 48 Enteric 48 subcellular compartments 48 ELISPOT 48 CD# CD# 48 Molecular biology 47 S. Aureus 47 FFPE tissues 47 Shc 47 Staphylococcus aureus 47 M. pneumoniae 47 intraepithelial neoplasia 47 Streptococcus 47 Immun 47 Salmonella Campylobacter 47 miRNA expression 47 excision repair 47 differentially expressed proteins 47 PCR amplification 47 channel ENaC 47 MRSA Methicillin resistant Staphylococcus 47 pN 47 trap mass spectrometer 47 microRNA profiling 47 Solexa sequencing 47 Qdot 47 glycan 47 Thermus thermophilus 47 Homology 47 mutational analysis 47 Confocal 47 pneumocystis 47 peritoneal fluid 47 arbovirus 47 HLA genotyping 47 figs. 47 solithromycin 47 rhenium Re 47 hemoglobins 47 parasitic nematode 47 transgenic mice expressing 47 differentially regulated 47 Proteus mirabilis 47 Protein Purification 47 avian H#N# influenza 47 X ray absorption spectroscopy 47 transgenic rats 47 bioassays 47 Nf2 47 cells transfected 47 Endothelial 47 S. pneumoniae 47 NO3 47 Coxsackievirus 47 spore forming bacterium 47 chick embryo 47 RNA seq 47 Bacterial Vaginosis 47 Fig. 1a 47 SAXS 47 striated muscle 47 coiled coil 47 paraffin embedded tissue 47 methicillin susceptible