Related by context. All words. (Click for frequent words.) 69 C. albicans 68 S. typhimurium 68 Enterobacter 67 commensal bacteria 67 trypanosome 67 C. neoformans 67 subtilis 67 C. jejuni 67 mycobacteria 66 Mycobacterium smegmatis 66 virulence genes 66 outer membrane proteins 66 lactis 66 rhizobia 66 mutant strains 66 hydrogenase 66 intracellular bacteria 66 nonpathogenic 66 innate immune responses 65 replicase 65 CRISPR Cas 65 Bt toxins 65 proteinase 65 homodimers 65 bacteria Escherichia coli 65 proteolytic 65 S. cerevisiae 65 H. influenzae 65 Bacillus subtilis 65 defensin 65 pea aphid 65 E. faecalis 65 Prevotella 65 B. anthracis 65 Rickettsia 65 Salmonella enterica 64 stilbene 64 Y. pestis 64 microfilariae 64 enterotoxin 64 virions 64 pathogenic bacterium 64 Francisella 64 lectins 64 cellular prion protein 64 Thermus thermophilus 64 Bacillus coagulans 64 bacterial virulence 64 S. enterica 64 CPEB 64 Bacteroides 64 Dictyostelium 64 PrP 64 trypanosomes 64 erythrocytes 64 phagocytic cells 64 Propionibacterium acnes 64 opportunistic pathogen 64 bacterial genomes 64 B. fragilis 64 GPx 63 Trypanosoma brucei 63 Dehalococcoides 63 protease enzyme 63 spore forming 63 herpesviruses 63 soluble proteins 63 dermatophytes 63 Aspergillus oryzae 63 spirochete 63 staphylococci 63 transgene expression 63 riboswitch 63 Saccharomyces 63 cofilin 63 P. syringae 63 Leptospira 63 vesicular stomatitis virus 63 P. gingivalis 63 replicon 63 phagocytosis 63 plastids 63 6S RNA 63 Mycoplasma pneumoniae 63 epidermidis 63 mutant proteins 63 viral proteins 63 olfactory receptor 63 tuberculosis bacterium 63 urease 63 endospores 63 N. benthamiana 63 operons 63 bacterium Escherichia coli 63 B. cereus 63 bacterias 63 endogenous retroviruses 63 yeast Saccharomyces cerevisiae 63 fig. S2 63 bacterial enzyme 63 HipA 63 Buchnera 63 Lactobacillus 63 Hsp# [001] 63 Bt toxin 63 brucei 63 symbiont 62 rifamycins 62 BChE 62 gp# [002] 62 epigenetically 62 serpin 62 tyrosine phosphorylation 62 hemoglobins 62 Shiga toxin 62 hemolymph 62 kDa protein 62 IFN gamma 62 Amino acid 62 CD8 T cells 62 selfing 62 amine oxidase 62 oocysts 62 astrocyte cells 62 Or#b 62 T. brucei 62 proteolysis 62 microbial flora 62 HLA B# 62 C. crescentus 62 mRNA transcripts 62 kinesin motor 62 L. monocytogenes 62 ciliated 62 monomeric 62 Xenopus laevis 62 SARS CoV 62 Toxoplasma 62 mucosal immunity 62 spore formation 62 #S rRNA genes 62 Nedd4 62 mucins 62 glycolipids 62 HCV replication 62 lipopolysaccharide LPS 62 chromosomal DNA 62 subcellular compartments 62 shiga toxin 62 defensins 62 peroxidase 62 B. pseudomallei 62 HSF1 62 immunodominant 62 S. pyogenes 61 enzymatic activity 61 Francisella tularensis 61 anaerobes 61 APOBEC3G 61 hsp# 61 Virulence 61 clonally 61 oryzae 61 protozoan 61 tetramers 61 effector proteins 61 NADPH 61 palmitate 61 chitinase 61 S. sanguinis 61 Mycobacterium 61 tetanus toxin 61 M. anisopliae 61 thale cress Arabidopsis thaliana 61 HepG2 cells 61 bacterial pathogen 61 L. pneumophila 61 avium 61 adenylate cyclase 61 virion 61 isoenzymes 61 endosymbiont 61 prion strains 61 eukaryotic cell 61 amino acid asparagine 61 synuclein 61 dsRNA 61 haemagglutinin 61 MnSOD 61 transcriptional activation 61 differential gene expression 61 normal prion protein 61 parainfluenza virus 61 secretory pathway 61 Phylogenetic analysis 61 Burkholderia 61 neutralizing antibody responses 61 mycobacterial 61 biofilm formation 61 TRIM5 61 Aspergillus flavus 61 fission yeast 61 PTPN# 61 poxvirus 61 trophoblast cells 61 exonuclease 61 Wolbachia 61 Helicobacter 61 lymphoid cells 61 morphogen 61 thermostable 61 arabinose 61 naturally occurring bacterium 61 Bifidobacterium 61 Enterococcus faecalis 61 Staphylococci 61 transmembrane protein 61 antimicrobial peptide 61 granzyme B 61 arsenite 61 microorganism 61 substrate specificity 61 epithelial barrier 61 clostridia 61 #S rRNA gene 61 histone H3 61 IgG4 61 PFGE 61 endonucleases 61 Rap1 61 alternatively spliced 61 Proteobacteria 61 capsular polysaccharide 61 TIR1 61 transgene 61 ortholog 61 mycobacterium 61 cerevisiae 61 capsid proteins 61 reassortant 61 RNA viruses 61 Prochlorococcus 61 Bifidobacteria 61 lysozyme 61 cellulases 61 Sindbis 61 rDNA 61 cellulase 61 albicans 61 cells transfected 61 Cyclin E 61 parasitoid 61 intracellular pathogens 61 somatostatin 61 Foxp3 61 CD1d 61 ciliates 61 Propionibacterium 61 antimicrobial peptides 61 cholera toxin 61 glycolytic 61 PrPC 61 pDC 61 pertussis toxin 61 bacilli 61 F. tularensis 61 lactobacilli 61 trimer 61 aminopeptidase 61 RNA ribonucleic acid 60 CagA 60 Typhi 60 typhimurium 60 tetramer 60 F actin 60 anthrax bacterium 60 Borrelia 60 organism 60 polymerases 60 phage 60 S. Typhimurium 60 bacterial toxin 60 pathogenic bacterial 60 bacterial symbiont 60 pathogenic strains 60 symbioses 60 transgenic rats 60 bifidobacterium 60 cytochrome c 60 μg ml 60 C. perfringens 60 autoreactive 60 bacterial strains 60 aleurone 60 Bacillus species 60 Escherichia Coli 60 constitutively 60 Trichoderma 60 flavivirus 60 caveolae 60 DNA polymerases 60 Aspergillus species 60 transgenic mice expressing 60 Enteritidis 60 photosystems 60 histone modification 60 ribosomal RNA 60 bacteria Bacillus 60 intestinal epithelial cells 60 glycosylated 60 T. vaginalis 60 S. neurona 60 IRE1 60 lipopolysaccharide 60 C. difficile toxins 60 indole 60 myrosinase 60 viral antigens 60 trypsin 60 transfected cells 60 fungus Aspergillus 60 prokaryote 60 hemagglutinin gene 60 Leishmania parasites 60 ESBL producing 60 oocyst 60 ribozyme 60 pathogenic fungus 60 Rhizobium 60 mRNA molecules 60 Pathogenicity 60 Borrelia burgdorferi 60 antigenicity 60 EF Tu 60 transcriptional repressor 60 prion proteins 60 immitis 60 pathogenic fungi 60 neutralizing antibody 60 orthologs 60 monocyte 60 hippocampal neurons 60 aneuploid 60 HLA G 60 attenuated strain 60 immature dendritic cells 60 osmotic stress 60 P. infestans 60 CD8 cells 60 filamentous fungus 60 Candida albicans 60 Roundworms 60 versicolor 60 Monocytes 60 bacterial ribosome 60 C. parvum 60 phytoplasma 60 Lactase 60 gut microbiota 60 SGK1 60 maternal antibodies 60 Th2 60 bacterial enzymes 60 purified protein 60 thermophilic 60 pRb 60 serum antibodies 60 Histoplasma capsulatum 60 ATPase activity 60 PC# cells 60 deleterious mutations 60 antibody IgE 60 miRNA expression 60 cotransporter 60 β lactamase 60 prostaglandin E2 PGE2 60 Escherichia 60 biosynthetic pathways 60 #S rRNA 60 exotoxin 60 K. pneumoniae 60 pathogen 60 trimers 60 fungal genomes 60 MDCK cells 60 phospholipase 60 replicative 60 IGFBP 60 alpha2 60 Caenorhabditis elegans 60 Nocardia 60 spermidine 60 viral infectivity 60 isozymes 60 P. putida 60 L. plantarum 60 enolase 60 recombinants 60 selenoproteins 60 peptide antigens 60 methyltransferases 60 cultured cells 59 MEFs 59 Staphylococcus epidermidis 59 CTLs 59 Streptomyces bacteria 59 Alu elements 59 peroxynitrite 59 C#BL 6 59 thermophilum 59 plasmodium 59 glycoprotein 59 Sindbis virus 59 FUS1 59 obligate intracellular 59 gut microbes 59 C EBP alpha 59 rRNA 59 phages 59 cytotoxin 59 tiny roundworm 59 odorant receptor 59 endonuclease 59 Bacillus spores 59 KLF4 59 putrescine 59 Inactivation 59 E1A 59 capsids 59 intracellularly 59 forskolin 59 Bcl 59 phagosomes 59 S. mutans 59 Entamoeba 59 aT cell 59 superantigen 59 transgenes 59 Schistosoma 59 subsp 59 humoral immunity 59 Pseudomonas syringae 59 endogenous retrovirus 59 Streptomyces 59 Brucella abortus 59 plastid 59 DGGE 59 Hemagglutinin 59 intestinal mucosa 59 highly pathogenic strains 59 biotinylated 59 annexin V 59 Cryptococcus neoformans 59 stoichiometry 59 rotifer 59 umbilical vein 59 probiotic Lactobacillus 59 glioma cells 59 iNOS 59 granulosa 59 Rab5 59 prion protein 59 intracellular pathogen 59 lysostaphin 59 LIS1 59 intestinal microbiota 59 cysteines 59 chemotactic 59 antigenic variation 59 adduct 59 bacterium E. coli 59 oxidized lipids 59 galactose 59 Trichinella 59 Deinococcus 59 anaerobic bacterium 59 plectasin 59 bacterium 59 RNA fragments 59 coexpression 59 C. botulinum 59 Pseudomonas fluorescens 59 gambiae 59 DHFR 59 amyloid fibrils 59 B. abortus 59 synthases 59 gut flora 59 suppressor gene 59 A. fumigatus 59 acetylated 59 protective antigen 59 cell lysis 59 superoxide radicals 59 Aspergillus niger 59 Neisseria 59 IFNg 59 chemically inactivated 59 enveloped viruses 59 mutant alleles 59 operon 59 gametocytes 59 PrPSc 59 bacterial colonies 59 Plasmodium 59 plasminogen 59 intestinal microflora 59 binding affinities 59 M. pneumoniae 59 methanogens 59 MALAT1 59 Immunohistochemical analysis 59 MyoD 59 sequence homology 59 heterozygote 59 Apobec3 59 M. bovis 59 quasispecies 59 C. glabrata 59 FGF2 59 Phenylalanine 59 SUMOylation 59 thymidine kinase 59 antisense RNA 59 salmonellae 59 Dictyostelium discoideum 59 H#N# influenza viruses 59 trimeric 59 immunized mice 59 gut microflora 59 Corynebacterium 59 laforin 59 siRNA knockdown 59 HtrA2 59 CYP#B# 59 prion protein PrP 59 metalloproteases 59 SMase 59 pepsin 59 stathmin 59 Wwox 59 catalytically active 59 cynomolgus macaques 59 piRNAs 59 kanamycin 59 IgG antibody 59 mutant strain 59 abnormal prions 59 FGFs 59 bacterial toxins 59 basophils 59 homodimer 59 catalytic antibodies 59 topoisomerase 59 anthrax toxin 59 cathepsin B 59 Penicillium 59 Bifidobacterium longum 59 symbionts 59 Fig. 3b 59 MMP# 59 Cyanothece 59 LNCaP cells 59 hemolysin 59 virulence factors 59 T. gondii 59 p# MAPK 59 glycoproteins 59 Lysozyme 59 serovar 59 P. aeruginosa 59 deacetylation 59 helminths 59 V. cholerae 59 supernatants 59 ribosomal proteins 59 Leydig cell 59 microflora 59 TRPV3 59 viral genome 59 biotype 59 cytopathic 59 keratinocytes 59 oncogenic transformation 59 membrane fusion 59 TRP channels 59 rotaviruses 59 tRNA synthetase 59 mice lacking 59 fig. S1 59 toxoids 59 inactivated influenza 59 Phytophthora species 59 glycoside 59 protein phosphatase 59 UCP2 59 phylogenetically 59 Lactobacillus reuteri 59 equimolar 59 Candida species 59 NKT cells 59 Neisseria meningitidis 59 synthetase 59 pestis 59 receptor gene 59 sialic acids 59 A. niger 59 Clostridium 59 leucine zipper 59 lysine residues 59 DNA gyrase 59 lectin 59 Cry1Ab 59 Anopheles gambiae 59 mycobacterium tuberculosis 58 poxviruses 58 ERK signaling 58 disulfide bond 58 physicochemical properties 58 serine 58 granulocytes 58 SIRT2 58 TB bacterium 58 H#K#me# 58 ribosomal protein 58 chromatin structure 58 spore forming bacteria 58 nucleolus 58 Htt 58 uPAR 58 xylanase 58 B. cepacia 58 allergenic proteins 58 A. gambiae 58 Germline 58 esterase 58 Escherichia coli bacteria 58 Supplementary Fig 58 PAK1 58 sporozoites 58 Candida glabrata 58 fumonisins 58 Wolbachia infection 58 TGF β1 58 proline 58 CD8 T cell 58 adaptive immunity 58 adenylyl cyclase 58 Lassa virus 58 polyploid 58 mutant allele 58 S. pombe 58 Trichophyton rubrum 58 Argonaute 58 nucleotide substitutions 58 TORC2 58 Probiotic bacteria 58 outcrossing 58 metazoan 58 symbiotic bacteria 58 tumor suppressor protein 58 L. bulgaricus 58 siderophore 58 paxillin 58 commensal 58 Vpu 58 immunological responses 58 mutant flies 58 HSCs 58 dimeric 58 glycosyltransferase 58 algal species 58 phosphatidylinositol 58 ribonuclease 58 TFH cells 58 sporulation 58 affinity purified 58 enzymatic pathways 58 L. acidophilus 58 wildtype 58 heterodimer 58 RNA binding 58 activin 58 proton pump 58 Tubulin 58 PON1 58 surface proteins hemagglutinin 58 unicellular algae 58 A. thaliana 58 Pax6 58 MAPKs 58 gliadin 58 Phosphorylation 58 cruzi 58 cyanobacterial 58 infantis 58 sclerotia 58 B. burgdorferi 58 missense mutations 58 constitutively active 58 isotypes 58 adrenoceptor 58 genes encode proteins 58 Toxoplasma gondii 58 BMP4 58 actinomycetes 58 Cytochrome 58 ligand receptor 58 mutagenesis 58 IFN γ 58 centrioles 58 proto oncogene 58 protein conformation 58 cyclization 58 MT1 MMP 58 Saccharomyces cerevisiae 58 insecticidal protein 58 Enterococcus faecium 58 nematode worm 58 Protease 58 chloroplasts 58 disulfide bonds 58 melanocyte 58 Streptococcus agalactiae 58 AChE 58 p# activation 58 SOD1 protein 58 toxigenic strains 58 oncoproteins 58 Lactobacilli 58 HLA gene 58 evolutionarily conserved 58 ESBLs 58 mousepox 58 Thorough cooking kills 58 PIP3 58 Mcl 1 58 immunofluorescence microscopy 58 deletion mutant 58 autophagic 58 cultured neurons 58 midgut 58 Arabidopsis plants 58 proteins 58 vancomycin resistant 58 Fig. 1C 58 typhi 58 reinhardtii 58 bacteria Pseudomonas 58 abzymes 58 beta subunit 58 heterozygotes 58 IFN g 58 pyrimidines 58 dendritic cells DCs 58 Pol IV 58 K#R [002] 58 hemolytic 58 Infectivity 58 hydrolase 58 chimeric gene 58 GFP fluorescence 58 phagocytes 58 protein subunits 58 thymocytes 58 RUNX3 58 heterochromatic 58 MTT assay 58 TAp# 58 nodulation 58 antisera 58 oxacillin 58 salivarius 58 leptin receptor 58 DNA polymerase 58 inbred strains 58 perilipin 58 single celled algae 58 Dpp 58 ribozymes 58 metalloproteins 58 protein secretion 58 drosophila 58 B. longum 58 TGF ß 58 P. falciparum parasites 58 diffusible 58 bacteriophage 58 enteroviral 58 oligomerization 58 arginase 58 Haemophilus 58 paralogs 58 AAV2 58 globin genes 58 Bacillus anthracis 58 embryoid bodies 58 chloroplast 58 glabrata 58 Wnts 58 BALB c mice 58 matrix metalloproteinase 58 pathogenic E. coli 58 Th1 cells 58 antibody secreting cells 58 intraperitoneal injection 58 intracellular pH 58 bacterial spores 58 catenin 58 cytidine 58 photosystem II 58 Agrobacterium tumefaciens 58 #S rDNA 58 GSK 3ß 58 isomerase 58 Caulobacter 58 diatom 58 glucosides 58 bovis 58 Mycobacterium bovis 58 IgG antibodies 58 transferrin receptor 58 VLPs 58 CRISPR 58 OCT4 58 Bifidobacterium infantis 58 immunoreactivity 58 HCV replicon 58 focal adhesions 58 phenotypic plasticity 58 pathogenic viruses 58 plasmacytoid dendritic cells 58 A. phagocytophilum 58 P. acnes 58 immunologically 58 PI3K signaling 58 root nodules 58 endosymbiosis 58 infectious prion proteins 58 reproduces asexually 58 Dopaminergic 58 RNA polymerases 58 neuroblastoma cells 58 polymorphs 58 dermatophyte 58 amino acid substitutions 58 mononuclear 58 granulocyte 58 Streptococcus thermophilus 58 budding yeast 58 Superoxide 58 Shewanella 58 TRPV4 58 stomatal 58 Serratia 58 hemoglobin molecule 58 rhodopsin 58 activated macrophages 58 T rubrum 58 Aeromonas 58 4E BP1 58 clade B 58 topoisomerase II 58 N Myc 58 JAK STAT 58 melatonin receptor 58 γ 58 coagulase negative staphylococci 58 pDCs 58 translationally 58 CLL cells 58 Varicella zoster 58 tropomyosin 58 CHIKV 58 beta actin 58 coreceptor 58 GRFT 58 insect vector 58 Agrobacterium 58 immunoglobulin G 58 hepatoma 58 5' triphosphate 58 membrane protein 58 protozoan parasite 58 SMN1 58 EBNA1 58 scorpion toxin 58 viral antigen 57 oxidative phosphorylation 57 ELISPOT assay 57 fluorescently labeled 57 oligomer 57 centromeres 57 secrete proteins 57 EGFP 57 commensals 57 Epstein Barr virus EBV 57 isoforms 57 VEGFR1 57 Symbiodinium 57 coevolution 57 collagen fibrils 57 fungal pathogens 57 Tetrahymena 57 fungus Metarhizium anisopliae 57 morphologically 57 Streptococcus salivarius 57 globular proteins 57 beta lactamases 57 hypericin 57 nanomolar 57 P selectin 57 FMR1 gene 57 protozoan parasites 57 secretase 57 microglial 57 PBMCs 57 photosynthetic bacterium 57 glucan 57 hyphae 57 thermophilus 57 HEK# cells 57 viral genomes 57 N. gonorrhoeae 57 neuroblasts 57 cDNA libraries 57 LPS induced 57 HCMV 57 protein Hsp# 57 lysates 57 PDZ domains 57 GAPDH 57 Immune responses 57 avidin 57 Cry1Ac 57 Schistosoma mansoni 57 degranulation 57 proline rich 57 nucleases 57 posttranslational modification 57 phosphorylate 57 SNARE complex 57 Streptococcus bacteria 57 heparan sulfate 57 cytochrome 57 oligomeric 57 photosynthetic machinery 57 CPT1c 57 adeno associated viruses 57 planarian 57 homolog 57 Streptococcus pyogenes 57 ectodomain 57 hexose 57 microbiota 57 paramyxoviruses 57 ZFN modified cells 57 Ku# 57 Interferon gamma 57 protein p# 57 c Src 57 viral particles 57 genes encoding 57 histone H4 57 RNA sequences 57 Xanthomonas 57 quinone 57 lipid bilayers 57 phosphorylates 57 antigenic 57 WNK1 57 RANTES 57 lipoxygenase 57 receptor mediated endocytosis 57 lung fibroblasts 57 lytic 57 epigenetic silencing 57 Taenia 57 fluorescently tagged 57 Langerhans cells 57 FKBP# 57 Cathepsin B 57 DNA demethylation 57 androgen receptor AR 57 thymocyte 57 Beta lactamase 57 heterologous 57 null mice 57 mutant worms 57 mammary cells 57 CD4 + cells 57 hemagglutinin HA 57 vacuolar 57 beta defensins 57 mutated protein 57 cytokine IL 57 amyloid peptide 57 synaptotagmin 57 monophyletic