Related by context. All words. (Click for frequent words.) 71 Transcriptome 71 differentially expressed genes 70 immunoblotting 70 cDNA microarray 70 transcriptomic 70 bronchial epithelial cells 69 Genotypes 69 Microarray analysis 69 Trichophyton rubrum 69 immunostaining 69 genetic loci 68 circadian genes 68 immunohistochemical analysis 68 chromosome #q#.# [002] 68 missense mutations 68 Phenotypic 68 differential gene expression 68 etiologic agent 68 metaplasia 68 lysine residues 68 proteolytic cleavage 68 Western blotting 68 miRNA expression 67 kDa protein 67 outer membrane proteins 67 Immunohistochemical staining 67 gastric adenocarcinoma 67 differentially expressed proteins 67 β1 67 Alkaline Phosphatase 67 H#K#me# 67 Polymorphisms 67 Oncogenic 67 #p# [003] 67 gene polymorphisms 67 Histological 67 immunofluorescence microscopy 66 sequence homology 66 #S rRNA 66 Inhibitory 66 quasispecies 66 ERalpha 66 susceptibility locus 66 bronchoalveolar 66 PCR RFLP 66 Nanobacteria 66 Phylogenetic analysis 66 Histopathologic 66 mononuclear 66 #S rDNA 66 proteomic analysis 66 chromosome #q#.# [001] 66 subcellular localization 66 amine oxidase 66 #S rRNA gene 66 Polymorphism 66 aberrant methylation 66 COL#A# 66 somatic mutations 66 interstitial fibrosis 66 Skeletal muscle 66 Immunohistochemical analysis 66 ultrastructural 66 chromosomal anomalies 66 Superoxide 66 immunohistochemical 66 microdeletions 66 denaturing gradient gel electrophoresis 65 functional polymorphism 65 hypothalamic pituitary 65 replicase 65 monogenic 65 GPx 65 mediated inhibition 65 prostate carcinomas 65 cDNAs 65 isotypes 65 ultrastructure 65 induced sputum 65 lung adenocarcinomas 65 ncRNA 65 microsatellite markers 65 Histological examination 65 hyperplastic 65 hemoglobins 65 PTPN# 65 intronic 65 gastric carcinoma 65 bronchoalveolar lavage 65 BRAF V#E 65 phylogenetic analyzes 65 pituitary adenomas 65 hamartomas 65 hypermethylated 65 SNP rs# [001] 65 orthologs 65 Elevated serum 65 Legg Calvé Perthes disease 65 Inactivation 65 cytotoxicity assays 65 vacuolar 65 Histopathological 65 quantitative trait loci 65 previously undescribed 65 PBMCs 65 Epitopes 65 genetic polymorphism 65 RRM1 65 surgically resected 65 immunoreactive 65 E. faecalis 65 virulence genes 65 susceptibility loci 64 cytochrome b 64 Clusterin 64 DGGE 64 Autoantibodies 64 Mutational 64 HER2 HER3 64 endothelial activation 64 urothelial carcinoma 64 metabolomic profiles 64 Corynebacterium 64 Telomere 64 immunofluorescence 64 HepG2 cells 64 prostate carcinoma 64 ABCB1 64 endonuclease 64 astrocytic 64 Electrophysiological 64 BAC clones 64 glomerular 64 synovial tissue 64 adducts 64 Histone 64 Dehydrogenase 64 heterozygotes 64 Cytoplasmic 64 splice variants 64 gastric carcinomas 64 Confocal microscopy 64 supernatants 64 Papillary 64 chromosome #q# [001] 64 clonal expansion 64 A. niger 64 Upregulation 64 murine model 64 Macrophage 64 inactivating mutations 64 C1q 64 GSTP1 64 Cerebrospinal fluid 64 intergenic regions 64 Eukaryotic 64 genetic polymorphisms 64 eccrine 64 constitutively expressed 64 mycobacterial 64 Estrogen Receptor 64 assay detects 64 ERK signaling 64 microglial 64 DHPLC 64 synthases 64 quantitative RT PCR 64 tumoral 64 MALDI TOF MS 64 carcinoembryonic antigen 64 DNA methylation patterns 64 RNA polymerases 64 metabolizing enzyme 64 gene locus 64 nodal metastasis 64 orthologous 64 lymphoid cells 64 AMACR 64 obligate intracellular 64 alveolar epithelial cells 64 cTnI 64 Endometrial 64 steroidogenic 63 phosphorylated tau 63 KRAS oncogene 63 null mice 63 secretory pathway 63 Epstein Barr Virus EBV 63 Cytochrome 63 Entamoeba histolytica 63 calculi 63 coexpression 63 proteoglycan 63 hydroxylase 63 trophoblast cells 63 Immunohistochemistry 63 Serum concentrations 63 adenylate cyclase 63 previously uncharacterized 63 Fig. 1b 63 colorectal carcinoma 63 E. histolytica 63 mesotheliomas 63 indel 63 chromosomal rearrangement 63 nucleic acid sequence 63 gene rearrangements 63 lysates 63 leiomyomas 63 PGC 1α 63 coding exons 63 caveolae 63 CHD7 63 Fibroblast 63 renal cysts 63 p# antigen 63 Haplotype 63 aminotransferase 63 HER2 neu 63 thyroid carcinoma 63 isolated perfused 63 serine protease 63 thymidine kinase 63 Histologic 63 nucleotide substitutions 63 mammalian proteins 63 Immunohistochemical 63 ploidy 63 MTT assay 63 Lp PLA 2 63 ribosomal DNA 63 EGF receptors 63 methyltransferase 63 cytokine receptors 63 Cytogenetic 63 VNTR 63 bacterial genomes 63 Infectivity 63 S. enterica 63 transmembrane protein 63 murine models 63 peptide fragment 63 cAMP signaling 63 TPMT 63 gastric mucosa 63 anterior pituitary 63 mammalian tissues 63 mRNA transcripts 63 promoter methylation 63 immunohistochemical staining 63 histopathologic examination 63 Salmonella enterica 63 etiologic 63 effector molecules 63 germline mutations 63 Amino acid 63 mRNA expression 63 Genotypic 63 TIMP 63 fig. S6 63 Neoplasms 63 ortholog 63 serologically 63 histopathological 63 cDNA library 63 beta1 integrin 63 ribosomal proteins 63 histological subtype 63 metastatic lymph nodes 63 ABCB1 gene 63 Figure 1A 63 acyltransferase 63 FGFR3 63 cytoplasmic domain 63 gene polymorphism 63 microsatellite loci 63 bronchoalveolar lavage fluid 63 hyperhomocysteinemia 63 Histologically 63 Secretase 63 rs# [004] 63 epithelial barrier 63 neuritic 63 beta amyloid peptides 63 motor neuron degeneration 63 affinity purified 63 mucinous 63 vaginalis 63 Leukemias 63 catechol O methyltransferase 63 Fig. 2b 63 serum antibodies 63 malignant nodules 63 CpG island 63 transgenic rats 63 ventricular myocardium 63 Mutagenesis 63 Serological 63 osteoprotegerin 63 RT qPCR 63 SDS PAGE 63 osteolytic lesions 63 adventitia 62 epithelioid 62 N. gonorrhoeae 62 Enterobacter 62 serum lactate 62 dimeric 62 RFLP 62 microsatellite instability 62 MMP# 62 extramedullary 62 splice junctions 62 intergenic 62 WNK1 62 Lymphoid 62 Fas ligand 62 osteoblastic 62 seropositivity 62 hepatoma 62 Dysregulation 62 fig. S1 62 ABL1 62 morphologic 62 diagnostic biomarker 62 perivascular 62 chromosome #p# [001] 62 upregulates 62 enteroviral 62 monocytic 62 neoplasias 62 ankyrin repeat 62 indels 62 PCA3 gene 62 #p#.# [001] 62 karyotypes 62 mitochondrial DNA mtDNA 62 Antigenic 62 brucei 62 Prevotella 62 cultured neurons 62 transcriptional repressor 62 Human Leukocyte Antigen 62 proteins secreted 62 aneuploidies 62 isoenzymes 62 bronchoalveolar lavage BAL 62 epithelia 62 prostate cancer PCa 62 tumorigenicity 62 HLA DQ2 62 IgM antibody 62 cell lysates 62 chromosome #q# [002] 62 apical membrane 62 distinct subtypes 62 Monocyte 62 transcriptional coactivator 62 TNFalpha 62 human chorionic gonadotropin hCG 62 IgG4 62 differentially regulated 62 Adenomas 62 ALK mutations 62 qRT PCR 62 cytokeratin 62 rRNA 62 steroidogenesis 62 Figure 2C 62 Ectopic 62 miRs 62 QT Prolongation 62 ribosomal protein 62 urothelial cancer 62 At#g# 62 Arabidopsis genome 62 LVNC 62 causative mutations 62 Pathogenicity 62 striated muscle 62 uPAR 62 P. gingivalis 62 acid phosphatase 62 Fig. 1E 62 fulminant hepatic failure 62 #p#.# [002] 62 seminal vesicle 62 FDG PET imaging 62 Chromosomal 62 transcriptional activation 62 histopathologic 62 Epidermal Growth Factor Receptor 62 nucleolar 62 HG PIN 62 tumor infiltrating lymphocytes 62 cerevisiae 62 HBV genotype 62 epididymal 62 directed mutagenesis 62 SMAD4 62 pulmonary metastases 62 aggrecan 62 cerebrospinal fluid CSF 62 isoenzyme 62 KLF4 62 cynomolgus monkeys 62 peroxidase 62 Alanine 62 heterologous expression 62 homogenates 62 NSCLC tumors 62 peroxisomal 62 ductal carcinomas 62 renal cell carcinomas 62 seminomas 62 proteolytic 62 HCT# 62 fig. S4 62 subcellular compartments 62 NR#A# 62 DNA glycosylase 62 Morphological 62 LNCaP cells 62 IPAH 62 transgene expression 62 Butyrate 62 primary hyperparathyroidism 62 mesangial 62 Activating mutations 62 kinome 62 Intracellular 62 RQ PCR 62 Tyrosine 62 mutational analysis 62 cytologic 62 anaplastic lymphoma kinase ALK 62 Virulence 62 MSH2 62 oligomeric 62 Fig. 2B 62 Rab5 62 p# biomarker 62 PON1 62 osteoid 62 pulmonary metastasis 62 cell nuclei 62 Dopaminergic 62 intercellular signaling 62 RT PCR assay 62 serological markers 62 NS5B 62 syngeneic 62 QTL mapping 62 colorectal adenocarcinoma 62 proto oncogene 62 spermidine 62 extracellular domains 62 astrocyte cells 62 Extracellular 62 urothelial 62 fruitfly Drosophila 62 potent inhibitors 62 exocrine 62 carboxyl terminal 62 epigenetic modification 62 cytological 62 Aspergillus nidulans 62 de novo mutations 62 osteopontin OPN 62 HGPIN 62 bone scintigraphy 62 β galactosidase 61 MEFs 61 clinicopathological 61 vesicular 61 aetiological 61 Propionibacterium acnes 61 Mycobacterial 61 B. longum 61 Supplementary Table 61 epidermidis 61 Myeloperoxidase 61 cellularity 61 rs# [001] 61 linkage disequilibrium 61 epithelial tumors 61 Ganoderma lucidum 61 radioligand 61 hepatocellular carcinomas 61 Oropharyngeal 61 Streptococcus agalactiae 61 homodimer 61 p tau 61 Leydig cell 61 serine threonine 61 L. pneumophila 61 lactate dehydrogenase 61 ligand induced 61 phospholipase 61 HER2 expression 61 fig. S2 61 polynucleotide 61 lymphangiogenesis 61 PC# cells 61 protein tyrosine phosphatase 61 thyrotropin 61 vimentin 61 neoplastic cells 61 causative mutation 61 sCJD 61 MRSA isolates 61 IgG antibody 61 PrPSc 61 methylated DNA 61 Kupffer cells 61 ADPKD 61 homozygosity 61 miRNAs miR 61 tumor biopsies 61 explants 61 genomewide 61 Genetic variation 61 KIAA# 61 plastid 61 herpesviruses 61 lung epithelial cells 61 transferrin receptor 61 inhibin B 61 #q#.# [001] 61 constitutively active 61 annexin V 61 hematoxylin 61 pleural fluid 61 dioxygenase 61 cotransporter 61 gadolinium enhanced 61 radioimmunoassay 61 Francisella 61 HEK# 61 Signaling Pathway 61 uricase 61 degranulation 61 extrahepatic 61 Plasmodium vivax 61 Sjögren syndrome 61 GLUT1 61 T. brucei 61 methicillin susceptible Staphylococcus aureus 61 schwannomas 61 proline rich 61 Modulates 61 mesenteric 61 melanocytic 61 homodimers 61 cisplatin resistant 61 deletion mutant 61 Staphylococci 61 DNA Methylation 61 immunoreactivity 61 Propionibacterium 61 Immunoassays 61 granulomatous 61 polyamine 61 Endothelial 61 Homeostasis 61 pylori 61 lymph node metastasis 61 sitosterol 61 Cathepsin B 61 histologic findings 61 gene MECP2 61 intracellular bacteria 61 tyrosine phosphorylation 61 hypointense 61 ß amyloid 61 Aeromonas 61 airway epithelial 61 μ opioid receptor 61 CDX2 61 Placental 61 linkage disequilibrium LD 61 Histopathologic examination 61 receptor mediated endocytosis 61 transabdominal 61 parasitaemia 61 trinucleotide 61 C#BL 6 mice 61 gene amplification 61 histone acetylation 61 chloroplast genome 61 benzimidazole 61 cardiac troponin T 61 SNCA 61 microsomal 61 leiomyoma 61 Hypothalamic 61 insertional 61 MLH1 61 oxysterols 61 cells overexpressing 61 matrix metalloproteinase MMP 61 PALB2 61 pleomorphic 61 coding genes 61 agarose gel electrophoresis 61 multigene 61 Squamous 61 childhood leukemias 61 epiphysis 61 myopathies 61 Rap1 61 MicroRNA 61 Supplemental Figure 61 Progenitor Cells 61 acyl CoA 61 ileal 61 prognostic significance 61 Phosphorylation 61 proximal tubule 61 noncoding RNAs 61 cytokine receptor 61 nitrates nitrites 61 TOP2A gene 61 intraperitoneal injection 61 chromosome #p#.# 61 metalloprotease 61 serovar 61 chromosome aberrations 61 genomic alterations 61 IgA deficiency 61 lyase 61 nucleoli 61 clinicopathologic 61 reflux esophagitis 61 RNase L 61 Fibroblast Growth Factor 61 TMPRSS2 ERG fusion 61 P cadherin 61 idiopathic myelofibrosis 61 lysing 61 Monocytes 61 proteinase 61 mtDNA mutations 61 reaction PCR 61 breast carcinomas 61 metastatic neuroendocrine tumors 61 Fig. 3b 61 colocalization 61 oocyte maturation 61 urolithiasis 61 tonsillar 61 trophoblasts 61 allele frequencies 61 mediated apoptosis 61 multinucleated 61 mediastinal lymph nodes 61 carcinomatosis 61 pyrimidine 61 tissue microarrays 61 Prostatic 61 echogenic foci 61 Caenorhabditis 61 ductal adenocarcinoma 61 Cytotoxic T 61 immunocytochemistry 61 morphometry 61 aneuploid 61 C#T [002] 61 lymphocytic 61 Hematopoietic 61 Overexpression 61 polycystin 61 enolase 61 physico chemical 61 histopathologic diagnosis 61 ADAMTS# 61 lymphoblastoid cell lines 61 CGG repeats 61 neuropathologic 61 NKX#.# 61 Dysplasia 61 MGUS 61 Figure 1C 61 proteomic analyzes 61 Monoclonal 61 Neisseria 61 cytochrome oxidase 61 transcranial Doppler ultrasound 61 cathepsin B 61 Nedd4 61 serum homocysteine 61 FDG uptake 61 dermatophytes 61 abacavir Ziagen 61 reticular 61 V#F mutation 61 vitro assay 61 hemolymph 61 hydrolase 61 SPECT CT imaging 61 glycolipids 61 bladder carcinoma 61 synovial 61 fluoroquinolone resistant 61 MDCK cells 61 Cytochrome P# 60 immuno modulatory 60 colonic mucosa 60 RANTES 60 peritoneal fluid 60 peptide receptor 60 non coding RNA 60 FGFs 60 bacteria Pseudomonas 60 EGFR mutant 60 pleiotropic effects 60 vivax 60 leukocyte counts 60 oxidases 60 tryptase 60 angiographically 60 amino terminal 60 normal karyotype 60 SSc 60 histopathological examination 60 Leydig cells 60 cis regulatory 60 myometrial 60 proteinases 60 xenobiotic 60 Protein Kinase 60 Transcription Factor 60 immunotoxicity 60 sphingolipid 60 Enterobacter cloacae 60 Nocardia 60 flow cytometric 60 Phylogenetic 60 striatal neurons 60 glycosylated 60 ciliated 60 bullous 60 BMP2 60 Viral RNA 60 gamete formation 60 mesenchymal stromal cells 60 heterochromatic 60 biopsy specimens 60 alkylating 60 3'UTR 60 phospholipase A2 60 Aspergillus species 60 microdeletion 60 glycan structures 60 allelic variants 60 autophagic 60 luciferase reporter 60 intestinal permeability 60 β2 60 fluconazole resistant 60 cruzi 60 flow cytometric analysis 60 apoE 60 tubule 60 cTnT 60 proteomes 60 proapoptotic 60 paralogs 60 nitrotyrosine 60 amyloidogenic 60 cell lysate 60 semiquantitative 60 osteochondromas 60 K ras mutations 60 N acetyl 60 engineered RAP peptides 60 Glycosylation 60 DNase 60 Phylogenetic analyzes 60 generalized vitiligo 60 oligonucleotide microarrays 60 renal tubular 60 interobserver 60 intrahepatic 60 Subtypes 60 esophageal squamous cell carcinoma 60 metabolizing enzymes 60 carbonyls 60 transcriptomes 60 haematopoietic 60 invasive carcinomas 60 milk oligosaccharides 60 molecular biomarkers 60 R#W [002] 60 myeloperoxidase 60 cDNA libraries 60 protein isoforms 60 Tr DNA 60 pT2 60 spontaneously hypertensive rats 60 Nucleotide 60 TGF alpha 60 fibrin deposition 60 C#BL/#J 60 repolarization 60 G6PD deficiency 60 microRNA profiling 60 Supplementary Figs 60 protein biosynthesis 60 FUS1 60 interindividual differences 60 nucleotide variations 60 intraventricular 60 downregulates 60 femora 60 trabecular 60 somatic mutation 60 preferentially bind 60 clade B 60 monoclonal gammopathy 60 uracil 60 HRCT 60 umbilical vein 60 ^ sup #m 60 mitochondrial gene 60 LRP6 60 immunofluorescent 60 myometrium 60 prostate cancer CaP 60 biochemical abnormalities 60 Trypanosoma brucei 60 interferon γ 60 ssDNA 60 pDC 60 Mitotic 60 PRNP 60 cyclin E 60 phenotypic characteristics 60 transcriptional profiling 60 esterases 60 Prefrontal 60 Salivary 60 transcriptomics 60 cytochromes 60 lipoxygenase 60 molecular diagnostic assay 60 transgenic mouse models 60 node metastasis 60 monomeric 60 esophageal carcinoma 60 Leptospira 60 trophoblast 60 transcriptional regulator 60 p#NTR 60 Candidatus 60 transcriptome sequencing 60 Synovial 60 LRP5 60 branching morphogenesis 60 untranslated regions 60 BPS IC 60 lesional 60 hypoperfusion 60 transferase 60 nephron 60 papillary carcinoma 60 cecal 60 C. trachomatis 60 #β estradiol 60 morphologic characteristics 60 serum biomarkers 60 metabolite concentrations 60 Jhdm2a 60 exocrine glands 60 adrenal cortex 60 sequenced genomes 60 erythrocytes 60 respiratory syndrome virus 60 TGF ß1 60 5 hmC 60 ß catenin 60 chlamydial 60 metazoans 60 papillary renal cell carcinoma 60 Cardiotoxicity 60 hydroxyproline 60 Biosynthesis 60 renal tubules 60 adrenocortical 60 stably transfected 60 paraneoplastic 60 florbetaben 60 plasma lipid 60 FLT3 60 pulmonary alveolar 60 conserved sequences 60 Macaca mulatta 60 corneal epithelial 60 H#K# [002] 60 idiopathic pulmonary 60 ectodomain 60 EGFR HER2 60 PCR amplified 60 BRAF protein 60 chondrocyte 60 ribonucleoprotein 60 epithelial tissues 60 Schematic representation 60 DNA demethylation 60 fluoroquinolone resistance 60 multiple logistic regression 60 TIMP 1 60 Cx# [001] 60 posttranslational modification 60 phosphorylated proteins 60 picomolar 60 Supplementary Fig 60 pathologic diagnosis 60 TRPV4 60 rCBF 60 morphometric analysis 60 GSTT1 60 glycated 60 Ischemic 60 Nicotinic 60 cyclic peptide 60 radiographic findings 60 synovial cells 60 airway hyperresponsiveness 60 TTR gene 60 nucleotide sequences 60 polyclonal 60 T#M 60 ncRNAs 60 Mesenchymal Stem Cells 60 histologic subtype 60 IL 1ß 60 polyploid 60 paragangliomas 60 adduct 60 periodontal pathogens 60 DNA methyltransferases 60 multiprotein complex 60 proteinaceous 60 annexin 60 ATTR CM 60 SGPT 60 Cytotoxicity 60 PLA2 60 paternally inherited 60 gadolinium Gd 60 Xenopus laevis 60 Lipoprotein 60 TMEM 60 astrocytomas 60 Cytomegalovirus CMV 60 TMPRSS2 ERG 60 hypervariable 60 somatostatin 60 macrophage infiltration 60 substrate specificity 60 Phenotypes 60 exotoxin 60 histone H3 60 N glycan 60 genetic locus 60 osteolytic 60 lacZ 60 androgen receptor AR 60 sulfated 60 insulin signaling pathways 59 depolarizing 59 cytochrome P 59 ischemic penumbra 59 immunofluorescence staining 59 leucocytes 59 MAPK pathway 59 hematopoietic progenitor cells 59 striata 59 immunoprecipitation 59 enterococcal 59 calcific 59 genomic loci 59 jejunal 59 chromosomal regions 59 gastric cardia 59 histologic examination 59 microRNA expression 59 immunohistochemistry IHC 59 S aureus 59 metachronous 59 invasive ductal 59 Basal Cell 59 receptor ligand 59 demyelinating 59 maternally inherited 59 Dpp 59 kinase domain 59 lavage fluid