Related by context. All words. (Click for frequent words.) 71 methylated DNA 70 cDNAs 70 mRNA molecules 69 #S rRNA gene 69 splice variants 69 splice junctions 68 amplicons 68 #S rRNA 67 somatic mutations 67 peptide sequences 67 non coding RNA 67 coding exons 67 intergenic regions 67 oligonucleotide probes 67 bacterial genomes 67 gene expression microarrays 67 PCR primers 67 miRNA expression 67 transcriptomes 66 microarray experiments 66 miRNA molecules 66 RNA polymerases 66 mRNA transcripts 66 pyrosequencing 66 nucleic acid molecules 66 megabases 66 heterochromatic 66 quantitative PCR 66 amplicon 66 RNA sequences 65 cDNA libraries 65 transcriptome 65 ribosomal RNA rRNA 65 5 hmC 65 nucleotide sequence 65 contigs 65 intergenic 65 RNA transcripts 65 yeast genome 65 untranslated regions 65 paraffin embedded tissue 65 shRNAs 65 aCGH 65 methylation patterns 65 intronic 65 nucleotide sequences 64 situ hybridization 64 noncoding RNAs 64 ncRNAs 64 Arabidopsis genes 64 quantitative RT PCR 64 assay detects 64 RT qPCR 64 genomic DNA 64 #S rDNA 64 mitochondrial gene 64 microsatellite loci 64 array CGH 64 Drosophila genome 64 subcellular localization 64 rRNA 64 genomic sequence 64 Sanger sequencing 64 proteomes 64 microRNAs miRNAs 64 microarray gene expression 64 kilobases 64 bisulfite sequencing 63 quantitative trait loci 63 cDNA clones 63 transcriptional regulation 63 RefSeq 63 short hairpin RNAs 63 antibody antigen 63 mitochondrial genomes 63 H#K#me# 63 transcriptome sequencing 63 transcriptomic 63 RNA ribonucleic acid 63 orthologs 63 Alu elements 63 chromatin immunoprecipitation ChIP 63 allelic 63 cDNA 63 immunostaining 63 gDNA 63 agarose gel electrophoresis 63 fluorescently labeled 63 somatic mutation 63 exome 63 transfection efficiency 63 sequence homology 63 cDNA microarray 63 ribosomal DNA 63 VNTR 63 coding sequences 63 cytosine methylation 63 microsatellite markers 63 oligonucleotide arrays 63 missense mutations 63 BAC clones 63 fluorescently tagged 63 peptoid 63 Raman spectra 63 Arabidopsis genome 63 gene expression 63 Transcriptome 62 flow cytometric 62 kilobase 62 outer membrane proteins 62 noncoding RNA 62 ChIP chip 62 PCR amplification 62 protein phosphorylation 62 chromosomal regions 62 genotyping arrays 62 histone modifications 62 protein isoforms 62 microRNA expression 62 exons 62 comparative genomic hybridization CGH 62 V3 loop 62 coding genes 62 peptoids 62 KIAA# 62 polynucleotide 62 fluorescence intensity 62 miRNA profiling 62 primate genomes 62 tissue microarrays 62 immunofluorescence microscopy 62 miRNAs 62 methylation markers 62 gene amplification 62 indels 62 hypermethylated 62 DNA sequences 62 experimentally validated 62 chromatograms 62 HybSelect 62 cell lysates 62 nucleases 62 transmembrane 62 RQ PCR 62 miRNA 62 #S rRNA genes 62 immunohistochemical analysis 62 mitochondrial DNA mtDNA 62 olfactory receptor 62 microarray analysis 62 biochemical assays 62 mRNA sequences 62 chromatin structure 62 de novo sequencing 62 chromatin immunoprecipitation 62 cDNA library 62 TMPRSS2 ERG 62 histone modification 62 enterotypes 61 targeted resequencing 61 3'UTR 61 genetic loci 61 receptor ligand 61 transcriptome analysis 61 circular dichroism 61 nucleic acid sequence 61 unmethylated 61 A. thaliana 61 multiplex PCR 61 lincRNA 61 proteomic analysis 61 biomolecular interactions 61 chromatogram 61 ncRNA 61 nucleotide substitutions 61 DGGE 61 SNP arrays 61 insertions deletions 61 paraffin embedded 61 multiplexed assays 61 siRNA knockdown 61 virulence genes 61 oligonucleotide microarrays 61 PCR amplified 61 cis regulatory 61 chromosomal DNA 61 polyadenylation 61 amino acid residues 61 loci 61 tumor biopsies 61 genomic alterations 61 mRNA expression 61 oligos 61 qRT PCR 61 linkage disequilibrium 61 differential gene expression 61 PrPSc 61 phylogenetic analyzes 61 cytochrome b 61 UTRs 61 RNA extraction 61 lacZ 61 segmental duplications 61 mutant alleles 61 quantitative reverse transcriptase 61 HEK# cells 61 gene expression profiles 61 messenger RNAs mRNAs 61 ChIP seq 61 siRNA duplexes 61 operons 61 noncoding 61 Confocal microscopy 60 immunohistochemistry IHC 60 viral genomes 60 operon 60 gene loci 60 array comparative genomic 60 extracellular domains 60 orthologous 60 reaction RT PCR 60 organism genome 60 microbial genomes 60 HER2 gene 60 Cathepsin B 60 amino acid sequence 60 PCR reactions 60 ribosomal proteins 60 transcriptome profiling 60 reaction PCR 60 differentially expressed genes 60 IL #p# 60 fluorescent molecules 60 chloroplast genome 60 formalin fixed 60 histone acetylation 60 biological molecules 60 tumorigenicity 60 multiplex assay 60 VeraCode 60 lentiviral 60 RNA molecules 60 ribonucleic acid RNA 60 tumor specific antigen 60 sequenced genome 60 protein ligand 60 metabolomic 60 number variation CNV 60 soluble proteins 60 Supplementary Fig 60 morphogens 60 ligand binding 60 promoter methylation 60 immunocytochemistry 60 enzymatic reactions 60 glycan structures 60 MALDI TOF MS 60 CRISPR 60 differentially expressed 60 lysate 60 maize genome 60 molecular biomarkers 60 CCL#L# 60 paralogs 60 reproducibly 60 ChIP Seq 60 DNase 60 RNA Seq 60 oligo 60 oligonucleotide microarray 60 transgene expression 60 induced sputum 60 fission yeast 60 splice variant 60 microarray 60 microRNA molecules 60 hippocampal neurons 60 unmethylated DNA 59 genes differentially expressed 59 Western blotting 59 fig. S1 59 transfected cells 59 nanoarrays 59 metazoan 59 cDNA synthesis 59 eukaryotic genomes 59 Genotypic 59 recombinant antibody 59 anterior pituitary 59 PCR assay 59 cell nuclei 59 genomic proteomic 59 number variations CNVs 59 transgenic mice expressing 59 prion strains 59 miRNA genes 59 chromosome aberrations 59 mammalian genomes 59 constitutively expressed 59 gene expression microarray 59 lincRNAs 59 FFPE tissue samples 59 At#g# 59 gene deletions 59 Tr DNA 59 comparative genomic hybridization 59 ribonucleic acids 59 transporter proteins 59 EGFR gene 59 NSCLC tumors 59 protein conformation 59 Xenopus laevis 59 epitopes 59 MDR1 59 lysates 59 micro RNA 59 sequenced genomes 59 subcellular 59 scanning microscopy 59 viral genome 59 ESTs 59 viral nucleic acids 59 variant allele 59 automated microscopy 59 indel 59 MAPK pathway 59 NPM1 mutations 59 nucleolar 59 electron micrograph 59 aggrecan 59 DNA microarray 59 analytes 59 N glycan 59 short hairpin RNA 59 trans splicing 59 metabolome 59 CagA 59 monodisperse 59 TMPRSS2 ERG fusion 59 #T# L1 59 enolase 59 cell organelles 59 ssDNA 59 RT PCR assay 59 peptide antigens 59 mitochondrial genome 59 micrometer scale 59 manually curated 59 capillary sequencing 59 M. pneumoniae 59 phenotyping 59 spectrophotometric 59 piRNAs 59 Clusterin 59 synthetic peptides 59 RNase L 59 nucleic 59 cryo electron microscopy 59 isoforms 59 metabolomic profiles 59 glycan 59 Microarray analysis 59 PCR RFLP 59 tropomyosin 59 exosome 59 HLA markers 59 Single Nucleotide Polymorphisms SNPs 59 polynucleotides 59 Xenopus embryos 59 sphingolipid 59 microbial genome 59 spatially distinct 59 ALK mutations 59 RNA splicing 59 RRM1 59 epigenetic modification 59 immunodominant 59 kinome 59 #S subunit 59 fungal genomes 59 IgG antibody 59 miR #b [002] 58 FFPE 58 replicon 58 nucleated cells 58 fruitfly Drosophila 58 #p#.# [001] 58 alternatively spliced 58 DNA methylation patterns 58 microRNA biomarkers 58 ciliated 58 serine threonine kinase 58 microRNA profiling 58 immunohistochemical 58 tetramers 58 exon 58 genomewide 58 denaturing gradient gel electrophoresis 58 #q#.# [002] 58 mRNA 58 secreted proteins 58 single nucleotide polymorphism 58 mRNAs 58 pathogenic mutations 58 Upregulation 58 guanosine 58 gene sequences 58 genes encoding 58 cultured neurons 58 MSn 58 Flow cytometry 58 gene expression patterns 58 exonuclease 58 malaria parasite genome 58 transduce 58 reverse transcriptase polymerase chain 58 electron microscopic 58 nuclease 58 polypeptides 58 TiO2 nanoparticles 58 cytochrome P#s 58 methyltransferases 58 nucleosome positioning 58 isotype 58 oligomer 58 telomeric 58 centromeres 58 CNVs 58 gene rearrangements 58 conserved sequences 58 Fig. 4a 58 QTLs 58 ultrastructural 58 clonally 58 PCR primer 58 coexpression 58 peripheral blood mononuclear 58 X ray diffraction pattern 58 microdissected 58 methyltransferase 58 miRview ™ squamous 58 Fig. 2b 58 β galactosidase 58 gene expression profiling 58 transmembrane proteins 58 CpG island 58 MTT assay 58 proteome 58 CRISPR Cas 58 trimers 58 serum antibodies 58 biotinylated 58 immunoglobulin genes 58 analyte 58 proteins encoded 58 fluorescence detection 58 non coding RNAs 58 PBMCs 58 luciferase reporter 58 genomic variants 58 transferrin receptor 58 cisplatin resistant 58 spectroscopically 58 nucleotide variations 58 nucleic acid sequences 58 situ hybridisation 58 FGF signaling 58 ELISA assays 58 5 methylcytosine 58 FGFs 58 absorption spectra 58 intron 58 genotypic 58 subcellular compartments 58 KCNQ1 58 L. pneumophila 58 antigen binding 58 adipogenic 58 HLA genotyping 58 genomic variation 58 immunofluorescence 58 TAp# 58 protein encoded 58 HOTAIR 58 bacterial isolates 58 pharmacodynamic markers 58 Gene Expression Assays 58 antibody arrays 58 immunofluorescent 58 polymerase chain reactions 58 CGH arrays 58 Prevotella 58 Pichia pastoris 58 intracellular protein 58 proteins nucleic acids 58 hybridomas 58 lymphoblastoid cell lines 58 virions 58 granzyme B 58 histopathologic 58 interactome 58 multiprotein complex 58 dimensional nanostructures 58 NF1 gene 58 viral RNA 58 MALAT1 58 adenoviral 58 p# antigen 58 hybridizations 58 microarrays 58 micro RNAs 58 isotypes 58 microdeletions 58 chromosome #q#.# [001] 58 nested PCR 58 Infinium assay 58 transiently transfected 58 SDS PAGE 58 β1 58 SNP Array #.# 58 kDa protein 58 endonuclease 58 #p# [003] 58 PALB2 58 prokaryotic 58 Solexa sequencing 58 haplotyping 58 PIK3CA 58 phenotypic 58 microwell 58 nucleotide substitution 58 heterodimers 58 centrioles 58 tissue microarray 58 CpG islands 58 hematoxylin 57 COL#A# 57 DNA Methylation 57 Anticalins ® 57 DEAR1 57 vesicle fusion 57 Immunohistochemical analysis 57 homodimers 57 microRNAs 57 sRNA 57 potent inhibitors 57 mutational analysis 57 dinucleotide 57 effector molecules 57 centromeric 57 antisense oligonucleotides 57 Single Nucleotide Polymorphism SNP 57 cDNA clone 57 PCR assays 57 IgG4 57 BeadChips 57 Jhdm2a 57 Aspergillus nidulans 57 nucleotide 57 CpG 57 EphB4 57 CD#c 57 replicase 57 uniparental 57 viral isolates 57 mycobacterial 57 Microarrays 57 multiplex ligation dependent 57 immunoblotting 57 bilayer graphene 57 nucleic acid fragments 57 histocompatibility 57 biophysical techniques 57 PTPN# 57 messenger RNA molecules 57 bioinformatic analysis 57 methylated genes 57 streptavidin 57 nonlinear optical 57 NR#A# gene 57 periodontal pathogens 57 messenger RNAs 57 spontaneous mutations 57 kinase profiling 57 recombination hotspots 57 BRAF protein 57 globin genes 57 LC-MS/MS 57 DNA demethylation 57 microRNA genes 57 substrate specificity 57 hierarchical clustering 57 Viral RNA 57 FUS1 57 exfoliated graphene 57 microarray datasets 57 autosomal 57 bilayers 57 metabolite concentrations 57 gene expression assays 57 RNA molecule 57 XL# inhibits 57 situ hybridization FISH 57 CSHL scientists 57 SIRT2 57 uPAR 57 annexin V 57 molecular scissors 57 ChIP 57 retrotransposon 57 germline cells 57 chromosomal anomalies 57 GnRH neurons 57 firefly luciferase 57 genome rearrangements 57 Illumina GoldenGate 57 metabolomic profiling 57 antisera 57 transduced 57 electrospray ionisation 57 colorectal tumor 57 NFKBIA 57 efflux pump 57 primordial germ cells 57 Dpp 57 ZNF# 57 X ray crystallographic 57 RFLP 57 phosphoprotein 57 recombinantly 57 macromolecule 57 chromosomal rearrangements 57 transfected 57 FFPE tissue 57 IgG1 57 miRNA sequences 57 GLUT4 57 FISH fluorescence 57 polymerases 57 Argonaute proteins 57 NS5B 57 maternally inherited 57 cryo EM 57 pleiotropic 57 fluorescent probes 57 gp# protein [002] 57 SurePrint 57 biosynthetic pathways 57 microwell plate 57 nanoprobe 57 Illumina Solexa 57 chromosome #p#.# 57 cytosolic 57 physiologically relevant 57 mtDNA mutations 57 magnetic beads 57 microbiomes 57 homodimer 57 diffraction pattern 57 bacterial genome 57 insertional mutagenesis 57 dbSNP 57 lysine residues 57 proinflammatory mediators 57 Genotypes 57 nanoprobes 57 causative mutations 57 p tau 57 serine protease 57 intracellular signaling 57 MiRNAs 57 Corynebacterium 57 GAPDH 57 gene locus 57 multigenic 57 EGF receptors 57 X. laevis 57 Illumina genotyping 57 dAbs 57 heterologous expression 57 dsRNA 57 chromatin proteins 57 MC1R gene 57 autism susceptibility genes 57 tyrosine phosphorylation 57 laser capture microdissection 57 inbred strains 57 methylation 57 massively parallel sequencing 57 microelectrode 57 SNP rs# [001] 57 proteomic analyzes 57 Sequencing Systems 57 #q# [001] 57 odorant receptor 57 physicochemical properties 57 FFPE tissues 57 quantitative PCR qPCR 57 Histone 57 MAPCs 57 membrane proximal 57 photoactivation 57 phosphorylated proteins 57 VSV G 57 nanometers billionths 57 putative biomarkers 57 cell lysate 57 differentially expressed proteins 57 cortical neurons 57 Mass Spectrometry MS 57 karyotype 57 fluorochrome 57 F actin 57 T. brucei 57 Cytochrome 57 synaptic proteins 57 vacuolar 57 quantitative gene expression 57 hybridoma cells 57 HLA molecules 57 nanoparticle aggregates 57 membrane proteins 57 miRNA expression profiles 57 miRNA assays 57 KRAS BRAF 57 mammalian tissues 57 micrographs 57 SMN2 gene 57 kDa 56 epigenomes 56 TaqMan assays 56 Htt 56 nanomolar 56 telomerase RNA 56 c myb 56 SNARE complex 56 alternative splicing 56 nAChRs 56 formalin fixed paraffin embedded 56 HLA DQ2 56 multiplex polymerase chain 56 PEDOT nanotubes 56 Mass spectrometers 56 fluorescent nanoparticles 56 hybridoma 56 C#T [002] 56 viral tropism 56 homologues 56 amino acid sequences 56 protein microarrays 56 Raman spectroscopic 56 Prox1 56 HLA alleles 56 synthases 56 enzymatic pathways 56 druggable targets 56 cellular organelles 56 immunoprecipitation 56 aneuploid 56 proto oncogene 56 Drosha 56 Mass spectrometry 56 extracellular matrix proteins 56 DNA methyltransferases 56 tissue biopsies 56 zinc finger nucleases 56 Fig. 2a 56 paternally inherited 56 ultrastructure 56 FGFR2 56 Trichophyton rubrum 56 morphogen 56 microRNA miRNA 56 keratinocyte 56 Immunofluorescence 56 previously uncharacterized 56 quasispecies 56 hypermethylation 56 Annexin V 56 ELISAs 56 MicroRNA 56 chemiluminescence 56 PGCs 56 Mycoplasma genitalium 56 miRNA biomarkers 56 enzymatically active 56 imaging mass spectrometry 56 vivo 56 ligand receptor 56 ATP synthase 56 transcriptomics 56 Immunohistochemistry 56 genomic rearrangements 56 dsDNA 56 S#A# [002] 56 5 hydroxymethylcytosine 56 RNA sequencing 56 mutagenesis 56 undifferentiated hESCs 56 obligate intracellular 56 cytolytic 56 C. neoformans 56 vimentin 56 affinity purified 56 spectroscopic techniques 56 annexin 56 homologous genes 56 immunochemical 56 pylori 56 PCA3 gene 56 genomic profiling 56 haplotype map 56 previously undescribed 56 neuroligins 56 TLE3 56 seminal vesicles 56 submicroscopic 56 eukaryotic cells 56 uncharacterized 56 hypervariable 56 quantitate 56 posttranslational modifications 56 HMGCR 56 uracil 56 ultraconserved elements 56 thermodynamic stability 56 PcG proteins 56 chromosomal aberrations 56 histone H4 56 Foxp2 56 SWCNTs 56 macrocyclic 56 cytopathic 56 fluorescence microscope 56 nanometer spatial 56 catalytically active 56 shRNA libraries 56 ERK2 56 ribonuclease 56 small interfering RNA 56 LRP5 56 m z 56 viral proteins 56 potent inhibition 56 metagenome 56 WT1 56 BCL#A 56 HER2 HER3 56 GPx 56 alpha synuclein protein 56 E. faecalis 56 transfection 56 voxels 56 binding affinities 56 peptides 56 E#F# 56 OGG1 56 Fibroblast Growth Factor Receptor 56 transcriptional machinery 56 morphologic 56 lipocalin 56 endospores 56 ENMD # 56 Her2 gene 56 histone H3 56 thymidylate synthase TS 56 BMP4 56 photon microscope 56 SOCS3 56 quantitative proteomics 56 Phenotypic 56 constitutively 56 μ opioid receptor 56 MALDI imaging 56 coding RNA 56 genomic deletions 56 malignant prostate 56 RNA synthesis 56 T#M 56 proteins 56 Kv#.# 56 X chromosome inactivation 56 toxicogenomic 56 polyploid 56 proteomics bioinformatics 56 NR2B subunit 56 CD# expression [001] 56 immunohistochemical staining 56 abnormal prions 56 Formalin fixed 56 microfluidic chip 56 chlorosomes 56 genomic 56 filamentous fungi 56 Kupffer cells 56 tetramer 56 synovial tissue 56 PKMzeta 56 Immunohistochemical staining 56 genotyping gene expression 56 interfering RNA 56 vitro cytotoxicity 56 luciferase 56 donor acceptor 56 HER2 expression 56 Anticalins R 56 carboxyl terminal 56 monogenic 56 aminoacyl tRNA synthetases 56 ESBA# 56 cysteines 56 Supplementary Table 56 DNA deoxyribonucleic acid 56 phosphatases 56 hamartomas 56 Xenopus 56 phylogenetic analysis 56 beta globin gene 56 Runx2 56 cellulases 56 cationic lipid 56 microRNA 56 FGFR3 56 comparative genomic 56 chromosome #q# [001] 56 RNA siRNA 56 costimulatory 56 ORFs 56 mutant allele 56 P cadherin 56 adenylate cyclase 56 multiplex assays 56 intramolecular 56 nanomechanical properties 56 C. jejuni 56 amyloid fibrils 56 RNAi mediated 56 transduction 56 glycosylated 56 macromolecular complexes 56 microglial 56 trypanosome 56 Fas ligand 56 ribonucleotide 56 HLA antigens 56 p# subunit 56 transcriptional activation 56 A. gambiae 56 hepatoma 56 causal variants 56 ciliates 56 hemagglutination inhibition HAI 56 hTERT 56 peroxidase 56 functional polymorphism 56 extracellular proteins 56 Entamoeba 56 qPCR 56 myoepithelial 56 presynaptic 56 heterozygosity 56 chromosome rearrangements 56 transcriptomics proteomics 56 zebrafish embryo 56 supernatants 56 messenger RNA mRNA molecules 56 EBNA1 56 somatostatin 56 M. genitalium 56 intracellular proteins 56 evolutionarily conserved 56 amino acid substitution 56 mammalian organisms 56 whole genome genotyping 56 S. cerevisiae 56 vitro assay 56 HipA 56 tRNA synthetase 56 Neandertal DNA 56 genetic recombination 56 hexamer 55 Wnt signaling pathway 55 progranulin gene 55 mammalian fatty acid 55 Cyclin E 55 deacetylation 55 shRNA 55 number variants CNVs 55 messenger RNA mRNA 55 translationally 55 X. tropicalis 55 Fourier transform 55 exomes 55 antibody reagents 55 conformational changes 55 BeadChip 55 DNMT1 55 biopsy specimens 55 quantitation