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(Click for frequent words.) 71 mRNA transcripts 71 transcriptional activation 71 EGFP 70 subcellular localization 70 transcriptional repressor 69 serine threonine kinase 69 intronic 69 constitutively active 69 luciferase gene 69 constitutively 69 Cre recombinase 69 ectopic expression 69 Htt 68 ChR2 68 lysates 68 TGF ß 68 luciferase 68 cystic fibrosis transmembrane conductance 68 stably transfected 67 firefly luciferase 67 FUS1 67 overexpressing 67 erythrocytes 67 carboxyl terminal 67 transduced 67 HepG2 cells 67 transiently transfected 67 transactivation 67 constitutively expressed 67 Jhdm2a 67 #S rRNA 67 alternatively spliced 67 Western blotting 67 Foxp3 67 β actin 67 Rap1 67 beta galactosidase 67 trophoblast 66 lymphoid cells 66 CaM 66 virulence genes 66 luciferase reporter 66 melanocyte 66 hTERT 66 HSV1 tk 66 β galactosidase 66 murine 66 HEK# cells 66 uPAR 66 DEAR1 66 downregulated 66 At#g# 66 COL#A# 66 homodimers 66 transgenic mice expressing 66 JAK STAT 66 cDNA library 66 coexpression 66 transfected 66 CD#c 66 kDa protein 66 astrocytic 66 Rab5 66 catenin 66 rRNA 66 telomerase reverse transcriptase 66 demethylase 66 tropomyosin 66 fluorescently labeled 65 annexin V 65 breast epithelial cells 65 Xenopus laevis 65 dimeric 65 MAP kinase 65 ribosomal protein 65 c myc 65 Luciferase 65 adducts 65 cDNAs 65 olfactory receptor 65 MT1 MMP 65 FGFR3 65 Immunohistochemical analysis 65 HER2 neu 65 condensin 65 transferrin receptor 65 transfected cells 65 hepatoma 65 provirus 65 Nedd4 65 Cx# [001] 65 C EBP alpha 65 ERK1 2 65 miR# 65 NKX#.# 65 VSV G 65 mice lacking 65 fluorescent tags 65 fission yeast 65 RNA polymerases 65 aminopeptidase 65 transgene expression 65 gene encoding 65 immunoblotting 65 beta globin 65 effector protein 65 noncoding 65 receptor gene 65 PC# cells 65 RUNX3 64 amino terminal 64 orthologous 64 cells overexpressing 64 coding exons 64 exonuclease 64 Corynebacterium 64 MDCK cells 64 operon 64 amine oxidase 64 3'UTR 64 p#Kip# 64 replicase 64 pyruvate kinase 64 bacterium Escherichia coli 64 cytoplasmic domain 64 retrotransposon 64 fluorescently tagged 64 TAp# 64 SIRT2 64 receptor tyrosine kinase 64 β1 64 PDGFR alpha 64 globin gene 64 CPEB 64 alveolar epithelial cells 64 HOTAIR 64 viral capsid 64 cardiac fibroblasts 64 gastric carcinomas 64 adduct 64 cultured rat 64 globin 64 P cadherin 64 heterochromatic 64 Fas ligand 64 Arabidopsis plants 64 Fig. 1C 64 ciliated 64 human mammary epithelial 64 CD#b 64 Smad4 64 Oncogenic 64 FGF signaling 64 N. benthamiana 64 ErbB4 64 siRNA knockdown 64 lentivirus 64 Clusterin 64 Green Fluorescent Protein 64 transmembrane protein 64 chick embryos 64 SLC#A# gene [001] 64 Kir#.# 64 TEL AML1 64 trophoblasts 64 enzymatic activity 64 T lymphocyte 64 ZNF# 64 vimentin 64 ortholog 64 epithelial cells lining 64 syngeneic 64 primordial germ cells 64 protein GFP 64 hematopoietic progenitors 64 vascular endothelial cells 64 cytosolic 64 cytochrome b 64 protein encoded 64 tyrosine kinase receptor 64 cDNA 64 noncoding regions 64 genes encoding 64 proline rich 64 short hairpin RNAs 64 enolase 64 outer membrane proteins 64 chick embryo 64 Dpp 64 colocalization 64 cultured neurons 64 S. cerevisiae 64 MLL gene 64 mitochondrial gene 63 sphingolipid 63 SMN1 63 wildtype 63 centromeric 63 proto oncogene 63 vesicular stomatitis virus 63 #S rDNA 63 mesenchyme 63 multinucleated 63 bronchial epithelial cells 63 alpha subunit 63 ß catenin 63 neurite outgrowth 63 DLC1 63 WT1 63 LNCaP cells 63 gene encodes protein 63 phosphorylates 63 Leydig cells 63 receptor CD# 63 PrP 63 cell adhesion molecule 63 TGF beta1 63 cells transfected 63 oncoprotein 63 DNMT1 63 immunofluorescence microscopy 63 polypeptide 63 vacuolar 63 #S rRNA gene 63 transcriptional regulation 63 chloroplast genome 63 Nanog 63 mitogen activated protein kinase 63 MEFs 63 orthologs 63 glycosylated 63 stably expressing 63 deacetylation 63 myocyte enhancer factor 63 mutant alleles 63 CpG island 63 Inactivation 63 mutant allele 63 HIF 1a 63 haematopoietic 63 fruitfly Drosophila 63 receptor mediated endocytosis 63 anaplastic lymphoma kinase ALK 63 mitogen activated protein kinases 63 homodimer 63 midgut 63 kinase gene 63 glutamate transporter 63 transmembrane 63 epigenetic modification 63 cellular prion protein 63 C1q 63 Sonic Hedgehog 63 PrPSc 63 BMP4 63 lentiviral 63 ribonuclease 63 frameshift mutation 63 H#K#me# 63 RRM1 63 Pax3 63 trophoblast cells 63 CagA 63 μ opioid receptor 63 retroviral vector 63 cisplatin resistant 63 Overexpression 63 Id1 63 mediated apoptosis 63 fascin 63 p#NTR 63 gag pol 63 zebrafish embryo 63 splenocytes 63 MMP9 63 Jurkat cells 63 beta actin 63 downregulates 63 striated muscle 63 IgG1 63 phosphoprotein 63 replicon 63 tumorigenicity 63 E#F# 63 dioxygenase 63 kinesin motor 63 occludin 63 PAK1 63 copper zinc superoxide 63 Supplementary Fig 63 noncoding RNA 63 adenylate cyclase 63 phospho 63 Upregulation 63 yeast Saccharomyces cerevisiae 63 transgenic mouse models 63 clonally 63 IRE1 63 GAPDH 63 proteinase 63 PEPCK 63 RNase L 63 transcriptionally active 63 caveolin 63 mesenchymal cells 63 CD1d 63 microRNA #a 63 trypanosome 63 transgene 63 tRNA synthetase 63 sequence homology 63 C#BL 6 mice 63 ncRNA 63 DMT1 62 apical membrane 62 ribosomal DNA 62 homeobox gene 62 RNA transcripts 62 cyclin dependent kinase inhibitor 62 Huntingtin 62 adipose cells 62 mRNA expression 62 histone demethylase 62 N Myc 62 effector molecules 62 PIP2 62 cytoplasmic 62 transmembrane receptor 62 zebrafish embryos 62 peroxisome 62 ovalbumin 62 Pichia pastoris 62 HepG2 62 chimeric protein 62 primordia 62 iNOS 62 peroxidase 62 maternally inherited 62 lysine residues 62 F actin 62 Phylogenetic analysis 62 Sox9 62 dsRNA 62 homolog 62 thrombospondin 62 methyltransferase 62 leptin receptor 62 embryonal carcinoma 62 microRNAs miRNAs 62 MEF2A 62 Rb#/p# 62 fibroblast cells 62 lysyl oxidase 62 astrocyte cells 62 caveolin 1 62 chondrocyte 62 chromatin immunoprecipitation 62 crystallin 62 polyamine 62 CD# CD# 62 Histone 62 PTPN# 62 P2X 62 gene p# 62 Smad3 62 mRNA molecules 62 plastids 62 morphogenesis 62 beta globin gene 62 Tetrahymena 62 biotinylated 62 plastid 62 STAT1 62 null mice 62 transcriptionally 62 adipogenic 62 focal adhesion kinase 62 MSH2 62 Entamoeba 62 antigenic epitopes 62 RCAN1 62 mouse embryos 62 micro RNA 62 fluorescent protein GFP 62 cell lysates 62 cysteine protease 62 encodes protein 62 Alu elements 62 KCNQ1 62 tumor suppressor protein 62 glucose transporter 62 S. pombe 62 MyoD 62 IRS1 62 ribosomal proteins 62 cytidine 62 VHL gene 62 PGCs 62 tumor suppressor p# 62 glycolipid 62 cathepsin B 62 hypermethylated 62 mucins 62 GPx 62 polyadenylation 62 valine 62 LDL receptor 62 intestinal epithelial cells 62 lysate 62 lymphoid tissue 62 SVZ 62 proteolytic cleavage 62 immunohistochemical analysis 62 GRP# 62 thymidylate synthase TS 62 histone modification 62 short hairpin RNA 62 unmutated 62 cytokeratin 62 metalloprotease 62 alpha lactalbumin 62 Thymus 62 mRNA cleavage 62 histone H4 62 non coding RNA 62 neural progenitor cells 62 immunofluorescence 62 OCT4 62 hippocampal neurons 62 p# deficient 62 autophagic 62 FasL 62 human ESCs 62 c KIT 62 sonic hedgehog 62 GLUT1 62 upregulates 62 c MYC 62 enzymatically active 62 cybrid 62 Germline 62 MDR1 62 CTCF 62 polynucleotide 62 T#M 62 endonuclease 62 MALAT1 62 keratinocyte 62 nuclease 62 uracil 62 CFTR cystic fibrosis transmembrane 62 anterior pituitary 62 p# NTR 62 morphogen 62 Shp2 62 Agrobacterium 62 germline cells 62 umbilical vein 62 Arabidopsis genome 62 apoE 62 cytokine receptor 62 Nup# 62 mammalian sperm 62 Sonic hedgehog 62 cytochrome 62 neurofilament 62 Confocal microscopy 62 SOCS3 62 perivascular 62 Cytotoxic T 62 SDS PAGE 62 ubiquitin ligase 62 CYP#B# 62 nucleolin 62 lung epithelial cells 62 glycoproteins 62 palytoxin 61 guanosine 61 Mcl 1 61 Hepatocytes 61 LRP6 61 RNA ribonucleic acid 61 GLUT4 61 histone H3 61 acyl CoA 61 COOH terminal 61 ERalpha 61 protein p# 61 proteolysis 61 enterocytes 61 ssDNA 61 mutant mouse 61 deoxy 61 GluR1 61 chromatin remodeling complex 61 serine protease 61 cell nuclei 61 chimeric gene 61 PAX5 61 tyrosine hydroxylase 61 sRNA 61 ubiquitylation 61 unmethylated 61 BCL#A 61 homologue 61 operons 61 1alpha 61 KLF4 61 beta subunit 61 microglial 61 missense mutation 61 H#K# [002] 61 progranulin gene 61 receptor molecule 61 rotifer 61 Nampt 61 acinar 61 microRNA miR 61 Saccharomyces 61 #T# L1 61 IL #R 61 hexose 61 pDC 61 Inappropriate activation 61 TTR gene 61 BALB c 61 p# p# 61 pRb 61 differential gene expression 61 LRP5 61 hematoxylin 61 TRPV4 61 mononuclear 61 overexpression 61 KIAA# 61 GATA3 61 normal prion protein 61 prion protein PrP 61 TRAF6 61 cells PBMC 61 4E BP1 61 neurturin 61 Chinese Hamster Ovary 61 paxillin 61 transmembrane domains 61 gene encodes 61 Extracellular 61 prokaryote 61 Kupffer cells 61 synovial tissue 61 SOX9 61 mouse testes 61 c fos 61 dinucleotide 61 R#W [002] 61 hepatocyte 61 C#BL 6 61 CD4 + CD# 61 PKM2 61 T. brucei 61 Secretase 61 EF Tu 61 survivin 61 myc 61 activin 61 Kv#.# 61 HLA DQ2 61 P. gingivalis 61 neural progenitor 61 extracellular domains 61 mutant proteins 61 Oct4 61 quantitative RT PCR 61 plasmacytoid dendritic cells 61 beta1 integrin 61 chimeric 61 globin genes 61 trypanosomes 61 endocytic 61 Fragile X mental retardation 61 MC4R gene 61 #p# [003] 61 aneuploid 61 heterodimers 61 HOX genes 61 synuclein 61 V#F mutation 61 cyclins 61 methylated DNA 61 monocyte 61 monocyte chemotactic protein 61 NFkB 61 microcephalin 61 glutamyl 61 protein fragment 61 Fibroblasts 61 MMP# 61 ribonucleic acid RNA 61 TERT 61 intracellularly 61 GNAQ 61 ERBB2 61 isoleucine 61 EGFR protein 61 FGFR4 61 neural progenitors 61 obligate intracellular 61 isoform 61 E3 ligase 61 pancreatic islet 61 membrane proximal 61 heterozygotes 61 immunoreactivity 61 microRNA molecule 61 TRIM5 61 prostate epithelial cells 61 NFAT 61 Peyer patches 61 immunohistochemical 61 stromal cells 61 Fig. 3d 61 homozygosity 61 recessive mutation 61 gene rearrangements 61 AMACR 61 agarose gel electrophoresis 61 p# MAPK 61 genomic loci 61 ERK signaling 61 synthases 61 estrogen receptor alpha 61 transcriptomes 61 chromatin modification 61 Phosphorylation 61 proteosome 61 peroxisomes 61 SCID mice 61 neoplastic cells 61 var genes 61 fibrogenesis 61 fibroblast 61 miR #b [001] 61 epithelia 61 CD4 + T lymphocytes 61 PIP3 61 phagocyte 61 dephosphorylation 61 transcriptional regulators 61 ^ sup #m 61 proapoptotic 61 oncogenic transformation 61 antibody antigen 61 thymic 61 phosphorylated 61 chemotactic 61 prion gene 61 thymidine 61 6S RNA 61 ras gene 61 eIF4E 61 cyclophilin D 61 palladin 61 Agrobacterium tumefaciens 61 viral genome 61 prodynorphin 61 c Fos 61 ryanodine receptor 61 mucin 61 CCL# 61 EphA2 61 E. faecalis 61 decarboxylase 61 Propionibacterium 61 situ hybridization 61 mRNA encoding 61 methylation patterns 61 microtubule associated 60 Fig. 2b 60 SATB1 60 functional polymorphism 60 PcG proteins 60 budding yeast 60 transgenic rats 60 c Src 60 C. neoformans 60 mouse fibroblasts 60 mononuclear cells 60 epigenetically 60 cyclin E 60 glioma cells 60 isomerase 60 avidin 60 superoxide dismutase SOD 60 esterase 60 eukaryotic cell 60 biochemical assays 60 immunoprecipitation 60 odorant receptor 60 indel 60 acid phosphatase 60 Fc receptors 60 GSTP1 60 miR #a [001] 60 phospholipase 60 supernatants 60 amino acid substitutions 60 homogenates 60 Cadherin 60 telomeric 60 evolutionarily conserved 60 HeLa cell 60 skin fibroblasts 60 Fig. 1c 60 thymidine kinase 60 nitric oxide synthase 60 furin 60 transgenic mouse model 60 coding genes 60 nasal epithelium 60 Or#b 60 APOBEC3G 60 GTPase 60 Î ² 60 allelic variants 60 inducible 60 mouse embryonic fibroblasts 60 secretory pathway 60 TLE3 60 ubiquitination 60 Transcriptome 60 MMP2 60 C. albicans 60 Klf4 60 actin polymerization 60 Tribolium 60 Cytochrome 60 cytochrome c 60 NOD SCID mice 60 chloroplast 60 eNOS 60 miRNA expression 60 metalloproteinase 60 tetramers 60 Ago2 60 monocytic 60 induced apoptosis 60 forkhead 60 serpin 60 tetramer 60 protein secreted 60 oligonucleotide microarrays 60 VE cadherin 60 FOXO3a 60 histone acetylation 60 CHD7 60 E3 ubiquitin ligase 60 glioblastoma cells 60 induced phosphorylation 60 Adeno associated 60 ribonucleic acids 60 transthyretin 60 directed mutagenesis 60 prion proteins 60 hnRNP 60 RNA siRNA 60 #S rRNA genes 60 telomerase gene 60 glyceraldehyde 3 60 metalloproteases 60 Rac1 60 cytotoxin 60 bone marrow stromal cells 60 urease 60 substrate specificity 60 Prevotella 60 lysosomal enzyme 60 lysing 60 colorectal tumor 60 Cyclin D1 60 proline 60 deletion mutant 60 cysteines 60 nucleolar 60 prostaglandin E2 PGE2 60 A. thaliana 60 MyD# 60 Streptomyces 60 Hh signaling 60 ligases 60 glutamine synthetase 60 phospholipase C 60 CD8 + 60 androgen receptor AR 60 Smad 60 meiotic recombination 60 hydroxylase 60 GLI1 60 HLA DR4 immune 60 CD8 cells 60 expressing GFP 60 basophils 60 epidermal cells 60 centromeres 60 cerevisiae 60 SCD1 60 EphB4 60 Mesenchymal 60 Matrigel 60 EGF receptor 60 parkin gene 60 PKD1 60 CDH1 60 tyrosine phosphorylation 60 reverse transcriptase polymerase chain 60 matrix metalloproteinase 60 IRF6 60 Cathepsin B 60 dynactin 60 transferase 60 steroidogenic 60 RANTES 60 Amino acid 60 mutant p# 60 colony stimulating factor 60 ciliates 60 XBP1 60 metabolomic profiles 60 BMAL1 60 oligosaccharide 60 V3 loop 60 homeobox 60 C#BL/#J 60 immunoglobulin genes 60 radial glia 60 erythroid 60 DU# [002] 60 ER alpha 60 RhoA 60 SMN2 gene 60 hemagglutinin gene 60 L. pneumophila 60 missense mutations 60 multiprotein complex 60 HER2 HER2 60 intracellular signaling 60 pylori 60 mediated inhibition 60 HIF 1α 60 metabolizing enzyme 60 epigenetic silencing 60 IL 1beta 60 mesenchymal stem cells MSCs 60 hematopoietic progenitor cells 60 transcriptional regulator 60 SNP rs# [001] 60 tumor specific antigen 60 proteins secreted 60 choroid plexus 60 PGC 1α 60 splice variants 60 RAD# [001] 60 intergenic 60 Fig. 1A 60 Sertoli cells 60 isoenzymes 60 carcinoembryonic antigen 60 Xenopus 60 intergenic regions 60 posttranslational modifications 60 glomerular 60 BMP2 60 mitochondrial DNA mtDNA 60 leucocytes 60 basolateral 60 olfactory receptor neurons 60 ESR1 60 kinase pathway 60 hyperactivation 60 Fig. 3c 60 NFKBIA 60 myo inositol 60 cyclase 60 fibrillin 1 60 proteoglycan 60 chemokine receptor 60 Argonaute 60 mesodermal 60 EGFR receptor 60 1beta 60 PALB2 60 UTRs 60 alveolar macrophages 60 plasminogen 60 reaction PCR 60 shRNAs 60 S. enterica 60 Wnt1 60 PB1 F2 60 interfering RNA 60 syntaxin 60 denaturing gradient gel electrophoresis 60 somatic mutations 60 carboxy terminal 60 lipopolysaccharide LPS 60 chromatin structure 60 mRNA 60 antiproliferative activity 60 BALB c mice 60 phosphoinositide 60 Sox2 60 Fc receptor 60 upregulated 60 parthenogenetic 60 ß1 60 TGF β1 60 quantitative trait loci 60 Sgk1 60 exocytosis 60 TGF alpha 60 focal adhesion kinase FAK 60 synaptotagmin 60 channelrhodopsin 60 mRNAs 60 lung fibroblasts 60 RNA sequences 60 CDK4 60 thymocyte 60 defensin 60 lysed 60 autoreactive 60 sphingomyelin 60 CEACAM1 60 DICER1 gene 60 cytochrome c oxidase 60 genotoxic stress 60 subcellular compartments 60 bovine serum albumin 60 metallothionein 60 PKD#L# 60 Caenorhabditis elegans 60 SLC#A# [002] 60 covalently linked 60 Hox gene 60 CCR7 60 nucleic acid molecules 60 genes differentially expressed 60 DNA methylation patterns 60 Nkx#.# 60 endoderm 60 Rad# 59 5 hmC 59 cofilin 59 vasopressin receptor 59 Lrp5 59 cDNA libraries 59 CHO cells 59 Cyclin E 59 prokaryotic 59 aryl hydrocarbon receptor 59 proteolytic 59 5' triphosphate 59 ADAM# 59 RAR beta 59 prostate carcinoma 59 Akt activation 59 polynucleotides 59 synthetase 59 pancreatic tissue 59 affinity purified 59 endogenous retroviruses 59 GABAergic neurons 59 Prox1 59 RNA molecule 59 CREBBP 59 Fig. 3a 59 RNA binding 59 intracellular pH 59 paternally inherited 59 immunostaining 59 SETDB1 59 peripheral blood mononuclear 59 mechanotransduction 59 miRNAs miR 59 receptor ligand 59 AMPA receptor 59 Cdx2 59 BMP signaling 59 transgenic mice 59 perinuclear 59 secretory proteins 59 focally 59 immunodominant 59 globular proteins 59 Androgen receptor 59 Monocytes 59 PDGFR 59 MYCN 59 opsin 59 Sp1