Related by context. All words. (Click for frequent words.) 76 phylogenies 76 phylogenetic tree 67 evolutionary relatedness 67 supertree 67 phylogeny 67 organism genome 66 phylogenetic 66 Phylogenetic 66 bacterial genomes 65 amino acid sequences 65 phylogenetically 65 eukaryote 65 mitochondrial genomes 64 polyploid 64 yeast genome 64 genome rearrangements 64 mammalian genomes 64 #S rDNA 64 mitochondrial gene 64 phylogenetic analyzes 64 genomic sequences 64 paralogs 63 fungal genomes 63 primate genomes 63 sequenced genomes 63 intergenic regions 63 archaeal 63 segmental duplications 63 clades 63 splice junctions 63 phylogeographic 63 A. thaliana 63 orthologous genes 63 homologous genes 63 RNA sequences 62 homologies 62 coevolution 62 phylogenetic relationships 62 cis regulatory 62 mitochondrial DNA mtDNA 62 Amborella 62 cDNA libraries 62 gene duplications 62 metazoan 62 orthologs 62 proteomes 62 phenotypic differences 62 operons 61 phylogenetic analysis 61 indel 61 phenotypic variation 61 indels 61 microsatellite markers 61 nucleotide sequence 61 transcriptomes 61 contigs 61 genetic lineages 61 genetic loci 61 viral genomes 61 #S rRNA 61 Drosophila genome 61 mtDNA sequences 61 monophyletic 61 molecular phylogeny 61 #S rRNA gene 60 genomic sequence 60 fission yeast 60 microbial genomes 60 clonally 60 nucleotide sequences 60 taxa 60 Alu elements 60 cDNA library 60 evolutionary lineages 60 subfamilies 60 Arabidopsis genome 59 bilaterians 59 chloroplast DNA 59 cDNAs 59 epistasis 59 ant genomes 59 antibody antigen 59 colugos 59 subnetworks 59 haplotype map 59 quantitative trait loci 59 prokaryotic 59 prokaryote 59 metagenomes 59 miRNA sequences 59 chloroplast genome 59 hominoid 59 metagenomic 59 mammalian fatty acid 59 histone modifications 59 maize genome 59 Arabidopsis genes 59 molecular phylogenetic 59 heritable traits 59 mammalian organisms 59 transcriptome sequencing 59 microarray datasets 59 computational algorithms 59 introgression 58 enterotypes 58 BAC clones 58 differential gene expression 58 noncoding 58 morphologically 58 DNA transposons 58 inbred strains 58 phylogenetics 58 subcellular compartments 58 evolvability 58 mitochondrial genome sequence 58 angiosperm 58 conserved sequences 58 polyploids 58 prion strains 58 phenotypic traits 58 lineages 58 eukaryotic genomes 58 gene sequences 58 vertebrate embryos 58 nucleotide substitutions 58 bacteria archaea 58 deuterostomes 58 allelic variation 58 cytosine methylation 58 sexually dimorphic 57 genomic rearrangements 57 metazoans 57 sequenced genome 57 fibril 57 orthologous 57 vertebrate genomes 57 taxon 57 eusociality 57 chromatid 57 chordates 57 recombination hotspots 57 nucleotide substitution 57 eukaryotic 57 spontaneous mutations 57 QTLs 57 interactome 57 computational methods 57 chromosomal DNA 57 polyhedra 57 microarray gene expression 57 chordate 57 ribosomal DNA 57 noncoding RNAs 57 subgenus 57 prion gene 57 comparative genomic 57 Micromonas 57 Phylogenetic analyzes 57 somatic mutations 57 genome sequences 57 body louse genome 57 haplotypes 57 X. laevis 57 spectroscopic techniques 57 gymnosperms 57 phytochrome 57 noncoding DNA 57 single celled yeast 57 Phytophthora species 57 mutational 57 exon intron 57 cytochrome b 57 angiosperms flowering plants 57 genetic relatedness 57 inferential statistics 57 transcriptome 57 5 hydroxymethylcytosine 57 synteny 57 multigene 57 unicellular 57 genetic sequences 57 soluble proteins 56 angiosperms 56 genomic proteomic 56 A. gambiae 56 Bayesian inference 56 cellulases 56 yeast prions 56 autosomal 56 mitochondrial genome 56 eukaryotic cell 56 guanine G 56 genomic variation 56 virulence genes 56 eukaryotic organisms 56 M. pneumoniae 56 linear regressions 56 pairwise 56 intergenic 56 matK 56 microbiomes 56 RNA viruses 56 protein subunits 56 cDNA microarray 56 reproductively isolated 56 positional cloning 56 tRNA genes 56 ribosomal RNA rRNA 56 ChIP seq 56 maternally inherited 56 gene expression profiles 56 untranslated regions 56 Pam Soltis 56 Mendelian 56 bilaterally symmetrical 56 artifactual 56 monozygotic twins 56 retrotransposons 56 nucleosome positioning 56 uncharacterized 56 P. patens 56 C. neoformans 56 Eukaryotes 56 telomere DNA 56 prokaryotes 56 microtissues 56 hemagglutinin gene 56 hybridizations 56 diploid genome 56 coding sequences 56 DNA sequences 56 gametophyte 56 non coding RNA 56 Hox gene 56 zebrafish genome 56 genotyping arrays 56 #S ribosomal RNA 56 Ediacara organisms 56 bioinformatic analysis 56 chimp genomes 56 symbioses 56 outbred 56 abnormal prion protein 56 placentals 56 mammalian brains 56 transcriptional profiling 56 rRNA 56 morphological evolution 56 meiotic recombination 56 transposable elements 56 comparative genomic analysis 56 donor acceptor 56 morphological traits 56 microarray experiments 56 kilobases 56 Neandertal DNA 56 haploid 56 prokaryotic cells 55 fruitfly Drosophila 55 kilobase 55 T. brucei 55 bdelloids 55 ribozyme 55 Dehalococcoides 55 protein ligand 55 neuroligins 55 ribosomal RNA 55 tetramers 55 platypus genome 55 RNA polymerases 55 homologous sequences 55 heterochromatic 55 sequence homology 55 sensu lato 55 morphologies 55 coding exons 55 Typhi 55 hominoids 55 morphological 55 unicellular organisms 55 Pollen grains 55 amplicons 55 spatially referenced 55 genetic makeups 55 morphological similarities 55 biological molecules 55 chromosomal rearrangements 55 bisulfite sequencing 55 mutualistic relationship 55 ontogeny 55 #S subunit 55 genomes 55 tissue microarrays 55 choanoflagellates 55 spatiotemporal 55 honeybee genome 55 PCR primer 55 X ray crystallographic 55 opossum genome 55 bacterial genome 55 extracellular proteins 55 insertions deletions 55 Trichoplax 55 lognormal 55 amino acid residues 55 comparative genomics 55 morphogen 55 bacterial symbiont 55 morphometrics 55 morphological characteristics 55 haplogroups 55 retrotransposon 55 distinct lineages 55 typologies 55 CRISPR 55 Dictyostelium 55 vegetatively 55 Neanderthal genome sequence 55 DEAR1 55 genome annotation 55 electron microscopic 55 Buchnera 55 centromeres 55 differentially expressed proteins 55 HLA genes 55 structural rearrangements 55 phenotypic characteristics 55 #S rRNA genes 55 ChIP chip 55 distantly related species 55 zebra finch genome 55 hyphae 55 EMBL scientists 55 breast cancer subtypes 55 splice variant 55 protein filaments 55 Phenotypic 54 pyrosequencing 54 RNA strands 54 budding yeast 54 bryozoans 54 neuroanatomical 54 taxonomic classification 54 genetic aberrations 54 macromolecule 54 Pseudomonas syringae 54 Woese 54 linkage disequilibrium 54 sRNA 54 multiprotein complex 54 antiparallel 54 spore formation 54 DNA methylation patterns 54 TRIM5 54 Venter genome 54 genetic blueprints 54 polynucleotide 54 quasispecies 54 H. habilis 54 coding genes 54 Homology 54 sexually reproducing 54 induced pluripotent cells 54 eukaryotic cells 54 genomically 54 genomic profiling 54 T. gondii 54 causative genes 54 genotypic 54 evolutionary divergence 54 CGG repeats 54 predator prey dynamics 54 epigenetic modification 54 animal phyla 54 ribonucleic acid RNA 54 kinome 54 telomeric 54 fluorescently labeled 54 subfamily 54 previously uncharacterized 54 embryoid bodies 54 chlorophyll molecules 54 mutant proteins 54 biogeographic 54 ontogenetic 54 DNA rearrangements 54 Gene Ontology 54 mutational analysis 54 Comparative genomics 54 highly pathogenic viruses 54 RNA transcripts 54 denaturing gradient gel electrophoresis 54 chromosome rearrangements 54 dinosaurian 54 introns 54 terrestrial vertebrates 54 Cucumis 54 parasitoid wasp 54 ciliated 54 missense mutations 54 epigenomes 54 multi celled organisms 54 mRNA molecules 54 Raman spectra 54 catalytically active 54 euchromatin 54 unnatural amino acids 54 somites 54 convergent evolution 54 fully sequenced genomes 54 Phylogenetic analysis 54 placental mammals 54 diffraction pattern 54 messenger RNA molecules 54 homologs 54 SARS CoV 54 chimpanzee genomes 54 allele frequencies 54 ncRNA 54 proteins misfold 54 Arabidopsis thaliana 54 molecular systematics 54 segmental duplication 54 spatial scales 54 DLX5 54 taxonomically 54 supramolecular 54 observable traits 54 piRNAs 54 crystallographic 54 Physarum 54 lianas 54 clonal 54 vesper bats 54 epigenetic markers 54 DNA strands 54 sea urchin genome 54 Prevotella 54 honey bee genome 54 chromosomal deletions 54 Paleobiology Database 54 amplicon 54 coexpression 54 dendritic 54 transcriptome profiling 54 phenotypes 54 macroevolution 54 gene annotation 54 previously undescribed 54 nematode Caenorhabditis elegans 54 protist 54 teosinte 54 hyperbolic geometry 54 artiodactyls 54 endosymbiosis 54 trimers 54 dimensional nanostructures 54 nonpathogenic 54 orangutan genome 54 IEnumerable 54 morphogens 54 differentially expressed genes 54 methylation patterns 54 computationally efficient 53 D. melanogaster 53 Prototaxites 53 chromosomal regions 53 H5 strains 53 epigenetic modifications 53 morphologically distinct 53 capillary sequencing 53 pleiotropy 53 quantitative RT PCR 53 peptoid 53 #q#.# [002] 53 symbiont 53 homologues 53 mammary stem cells 53 genomic loci 53 C. jejuni 53 cypin 53 cellular organelles 53 genomewide 53 plastid 53 L1 retrotransposons 53 biogeographical 53 chromosomal rearrangement 53 miRNA expression 53 PFGE 53 TMPRSS2 ERG fusion 53 Ventastega 53 posttranslational modifications 53 girih tiles 53 heterojunctions 53 #BP# 53 ChIP Seq 53 arabidopsis 53 mammalian circadian clock 53 Mycoplasma genitalium 53 Single Nucleotide Polymorphisms SNPs 53 ant colonies 53 L. pneumophila 53 paraffin embedded tissue 53 thymine T 53 Volvox 53 disulfide bond 53 neural crest cells 53 pseudogene 53 viral genome 53 transcriptomics 53 mutualistic 53 genomic alterations 53 mtDNA 53 intronic 53 Acropora 53 DNA deoxyribonucleic acid 53 mtDNA mutations 53 cnidarians 53 genuses 53 de novo mutations 53 inhomogeneities 53 tetraploid 53 fruiting bodies 53 splice variants 53 bdelloid rotifer 53 diploid 53 microscopic single celled 53 V3 loop 53 lincRNAs 53 motile cells 53 transgenic mouse models 53 fractal patterns 53 Heterodontosaurus 53 aptamers derives 53 yeast Saccharomyces cerevisiae 53 globin genes 53 eusocial 53 quasicrystal 53 uncharacterized genes 53 deleterious mutations 53 DNA helix 53 monomorphic 53 mtDNA sequence 53 proteomic analyzes 53 homology 53 H#Y 53 plexiform 53 multicellular organisms 53 amyloid fibers 53 conformations 53 Deinococcus 53 3'UTR 53 deterministically 53 hypermethylated 53 LRRK2 gene 53 CYP#D# gene 53 transcriptomic 53 Anopheles gambiae 53 imprinted genes 53 thermophilum 53 genetically identical 53 micrometer scale 53 ploidy 53 Deoxyribonucleic acid DNA 53 odorant receptor 53 RFLP 53 CRISPR Cas 53 colloidal crystals 53 surface proteins hemagglutinin 53 microbial genome 53 N glycans 53 punctate 53 intraspecific 53 microRNA molecule 53 fluorescently tagged 53 reassortant viruses 53 S. pombe 53 fossilized fragments 53 Plasmodium species 53 ciliates 53 heterochromatin 53 Xenopus 53 spatially explicit 53 endosymbiont 53 dimorphic 53 amino acid substitutions 53 multi celled 53 Tribolium 53 RNA seq 53 peptidoglycan 53 photosystems 53 olfactory receptor 53 genetic rearrangements 53 bdelloid 53 jawed vertebrates 53 Nup# 53 putative biomarkers 53 Xenopus tropicalis 53 ribosomal RNA gene 53 epidermal cells 53 invertebrate animals 53 molecular subtypes 53 hierarchical clustering 53 short hairpin RNAs 53 dimeric 53 tumor suppressors cytokines 53 mutant strains 53 conifers ferns 53 proteins encoded 53 mRNA transcripts 53 evolutionary lineage 53 microdeletions 53 parthenogenetic 53 Linear regression 53 PALB2 53 polyploidy 53 S. maltophilia 53 lymphoblastoid cell lines 52 moths butterflies 52 aneuploid 52 Chlamydomonas 52 pseudogenes 52 taxonomical 52 Transcriptome 52 biosynthetic pathways 52 lincRNA 52 x ray crystallographic 52 phenotypically 52 microcephalin 52 noncoding RNA 52 Prochlorococcus 52 A. ramidus 52 chromatin proteins 52 massively parallel sequencing 52 germline cells 52 etiologic 52 fig. S1 52 chromosomal translocations 52 mosaicism 52 Homo neanderthalensis 52 Agrobacterium tumefaciens 52 KIAA# 52 alpha helices 52 microbialites 52 genetic recombination 52 immunofluorescent 52 macromolecular complexes 52 causative mutations 52 protein conformation 52 Poisson regression 52 oligonucleotide microarrays 52 topological 52 gene rearrangements 52 Chlamydomonas reinhardtii 52 oscillatory 52 VNTR 52 combinatorial libraries 52 monocots 52 Heliconius 52 MLL gene 52 spectral fingerprints 52 ABCB1 gene 52 spectrograms 52 substrate specificity 52 primate lineage 52 M. anisopliae 52 netlists 52 retinal neurons 52 HLA G 52 S. cerevisiae 52 gene amplification 52 genetically divergent 52 immunodominant 52 histone H4 52 aneuploid cells 52 PRNP 52 spectral reflectance 52 NF1 gene 52 physicochemical properties 52 PrPC 52 Dicer enzyme 52 Entamoeba 52 homochirality 52 microRNA molecules 52 chromosome #p#.# 52 tissue microarray 52 deletion mutant 52 faunal 52 temporal variability 52 coiled coil 52 transcriptome analysis 52 silico prediction 52 amino acid sequence 52 siRNA knockdown 52 gambiae 52 transcriptionally active 52 genotype phenotype 52 bacterium genome 52 vacuolar 52 evolutionary conserved 52 Decoding genome 52 heritable variation 52 polygenic 52 extracellular domains 52 allelic 52 experimentally validated 52 chlorosome 52 cryo electron microscopy 52 parametrically 52 GenBank database 52 hypervariable 52 female gametophyte 52 filoviruses 52 Tianyulong 52 thale cress Arabidopsis thaliana 52 typological 52 homologous 52 paramyxoviruses 52 modifier genes 52 teleost fish 52 superposed 52 photosynthetic apparatus 52 paleoenvironmental 52 evolutionary trajectories 52 distinct subtypes 52 directed mutagenesis 52 ultrastructural 52 Trichophyton rubrum 52 hexamer 52 Microraptor gui 52 exons 52 habilis 52 causal variants 52 ornithischians 52 Htt 52 DLC1 52 postnatal foreskin fibroblasts 52 plastids 52 P. falciparum 52 chromosome #q#.# [001] 52 chromatin immunoprecipitation ChIP 52 Cy3 52 metabolomic profiling 52 Ichthyostega 52 Galapagos finches 52 polymerase enzyme 52 CSHL scientists 52 antisense strand 52 sRNAs 52 trypanosome 52 epigenomic 52 Arabidopsis plants 52 Caenorhabditis 52 chromosome aberrations 52 chromatogram 52 gene deletions 52 gene expression patterns 52 chromatin structure 52 chimpanzee genome 52 Prairie voles 52 karyotypes 52 pea aphid 52 nanowire arrays 52 comparative genomic hybridization CGH 52 ligand receptor 52 phenotypic plasticity 52 alternatively spliced 52 nanoparticle aggregates 52 fig. S4 52 planaria 52 reproduce asexually 52 nonoverlapping 52 H#N# isolates 52 ORFs 52 unisexual 52 bimodal distribution 52 MALAT1 52 C. albicans 52 HLA molecules 52 MAPCs 52 cell nuclei 52 worm C. elegans 52 A. sediba 52 homozygosity 52 temporal scales 52 exomes 52 chromosome #q# [001] 52 single celled microbes 52 inflorescences 52 Cryo EM 52 epitopes 52 ultraconserved elements 52 var genes 52 carbonaceous meteorites 52 tessellations 52 electron micrographs 52 recombinations 52 gamma proteobacteria 52 Yamanaka recipe 52 Leptospira 52 fungal strains 52 Fanconi proteins 52 RNA fragments 52 tyrannosaurids 52 Saccharomyces 52 annelid worms 52 Borrelia 51 proteomic analysis 51 Pol IV 51 phyla 51 loxP 51 adventitious roots 51 subcellular 51 photosystem 51 phenotypic 51 filamentous fungi 51 neutralizing antibody responses 51 rDNA 51 radiocarbon tests 51 paternally inherited 51 epigenetic regulation 51 nucleobases 51 Hsp# [001] 51 Guanlong wucaii 51 multigenic 51 pathogenic mutations 51 clinicopathologic 51 non mammalian vertebrates 51 plant Arabidopsis 51 artificial chromosomes 51 lactase persistence 51 epistatic 51 immunological synapse 51 molecular markers 51 holotype 51 serum antibodies 51 ESTs 51 outer membrane proteins 51 bdelloid rotifers 51 Brachypodium 51 PrPSc 51 B. burgdorferi 51 electrophysiological properties 51 floras 51 Supplementary Fig 51 fruitflies 51 red harvester ant 51 stereochemical 51 germline mutations 51 nanomagnets 51 spatial variability 51 spontaneous mutation 51 spliceosome 51 ab initio calculations 51 magnetosomes 51 histopathologic examination 51 blastomeres 51 hypotheses 51 multicellular 51 VHL gene 51 epiblast stem cells 51 parameterized 51 UTRs 51 capsid proteins 51 bistability 51 microRNA expression 51 evolutionary computation 51 QTL mapping 51 malaria parasite genome 51 logistic regression models 51 poly dA 51 biogeography 51 microsatellite loci 51 nucleoprotein 51 proline rich 51 Plasmodium 51 Macaca mulatta 51 chick embryos 51 Sanger sequencing 51 African cichlid fish 51 fission fusion 51 chromatin immunoprecipitation 51 bandgaps 51 homology modeling 51 polymerases 51 morphometric 51 biochemical assays 51 neuronal circuitry 51 GFP fluorescence 51 tiny roundworm 51 Candida species 51 Apobec3 51 ultracold molecules 51 underlying molecular mechanisms 51 geomorphological 51 absorption spectra 51 clade 51 Neandertal genome 51 metabolome 51 intramolecular 51 At#g# 51 HOTAIR 51 logistic regressions 51 systematics 51 vesicle fusion 51 ssDNA 51 superorganism 51 oligonucleotide microarray 51 mutant allele 51 Xenopus laevis 51 LPA gene 51 laforin 51 glycan 51 glycosylated 51 polygonal shapes 51 CTCF 51 endophenotypes 51 hippocampal neurons 51 Gaussian distribution 51 silicon nanowire 51 TCF#L# gene 51 salivary proteins 51 colloidal crystal 51 cynomolgus macaques 51 amphioxus 51 genomic deletions 51 metapopulation 51 FUS1 51 physicochemical 51 woolly mammoth genome 51 ribonucleic acids 51 isotope ratios 51 proteomic technologies 51 chimerism 51 polynucleotides 51 odorant molecule 51 mammalian evolution 51 silencing RNAs 51 gold nanostars 51 microenvironments 51 normal prion protein 51 prion protein gene 51 Foxp2 51 metabolomic 51 oligomeric 51 thymine 51 ortholog 51 synthetic peptides 51 flatfishes 51 amino acid alanine 51 VLPs 51 conformational changes 51 cDNA clones 51 tiling arrays 51 wavefronts 51 globular proteins 51 vertebrate evolution 51 DFT calculations 51 ncRNAs 51 connectome 51 Gene Ontology terms 51 filamentous structures 51 Confocal microscopy 51 thermodynamic stability 51 entangled qubits 51 differentially regulated 51 bases adenine 51 clinicopathological 51 PCR primers 51 MiRNAs 51 transposon 51 taxonomic 51 Wolbachia infection 51 meristem 51 micro RNAs 51 genetic determinants 51 zebrafish Danio rerio 51 evolutionary origins 51 microtubule binding 51 titin 51 binary asteroid 51 perilipin 51 fluorescent molecules 51 condensin 51 P. putida 51 GFP fusion 51 FOXP2 gene 51 M. genitalium 51 Drosophila melanogaster 51 VeraCode 51 nonrandom 51 eigenvalues 51 chlorophylls 51 Maxwell equations 51 Culex quinquefasciatus 51 LIS1 51 microdeletion 51 geologies 51 JCSG