Related by context. All words. (Click for frequent words.) 64 #S rRNA 61 #S rRNA gene 60 rDNA 60 microsatellite markers 60 #S rDNA 59 Phylogenetic analysis 59 Transcriptome 59 intronic 58 rRNA 58 methyltransferase 58 H#K#me# 58 agarose gel electrophoresis 58 ribosomal DNA 58 phylogenetic analyzes 57 orthologous 57 fig. S1 57 A. thaliana 57 VNTR 57 L. pneumophila 57 PCR RFLP 57 orthologs 57 kDa protein 57 immunofluorescence microscopy 57 mycobacterial 56 archaeal 56 virulence genes 56 hypervariable 56 quantitative trait loci 56 Xenopus laevis 56 BAC clones 56 Genotypic 56 subcellular localization 56 fruitfly Drosophila 56 cis regulatory 56 dinucleotide 56 #S rRNA genes 56 budding yeast 56 sequence homology 56 ploidy 56 X chromosome inactivation 56 immunostaining 56 fig. S4 55 cytochrome b 55 indel 55 homodimers 55 clade C 55 bronchial epithelial cells 55 PCR amplified 55 HLA DQ2 55 RNA polymerases 55 homologues 55 assay detects 55 intergenic regions 55 outer membrane proteins 55 protein phosphorylation 55 carboxyl terminal 55 amino terminal 55 noncoding 55 mitochondrial DNA mtDNA 55 ortholog 55 RFLP 55 R#W [002] 55 unmethylated 55 figs. 55 lysates 55 Alu elements 55 intergenic 55 experimentally validated 55 constitutively expressed 55 mutational analysis 54 miRNA expression 54 heterochromatic 54 lysine residues 54 metabolomic profiles 54 cDNA microarray 54 proteomic analysis 54 synthases 54 coding exons 54 ribonucleotide 54 surface proteins hemagglutinin 54 S. cerevisiae 54 Fig. 2a 54 GenBank accession 54 transiently transfected 54 C#Y 54 hemagglutinin gene 54 PBMCs 54 β galactosidase 54 mRNA transcripts 54 meiotic 54 genetic loci 54 Corynebacterium 54 immunodominant 54 T. brucei 54 KRAS oncogene 54 Extracellular 54 gene rearrangements 54 nucleotide sequences 54 bases adenine 54 zygotic 53 exonuclease 53 Replikin 53 mitochondrial gene 53 At#g# 53 bacterial genomes 53 aneuploid 53 hemagglutinin H 53 C#BL 6 53 cDNA libraries 53 human mammary epithelial 53 tetramer 53 allelic 53 paramyxoviruses 53 lymphoid cells 53 H#N# isolates 53 immunoglobulin genes 53 intensively studied 53 chick embryo 53 P. patens 53 transcriptome sequencing 52 wildtype 52 affinity purified 52 transgenic rats 52 proviral DNA 52 obligate intracellular 52 PFGE 52 transcriptional activation 52 operons 52 cDNA library 52 peptide receptor 52 operon 52 Leydig cells 52 oocyte maturation 52 sequenced genomes 52 T rubrum 52 null mice 52 polyploid 52 Fig. 1D 52 maternally inherited 52 polynucleotide 52 untranslated regions 52 Arabidopsis genome 52 ribosomal RNA rRNA 52 tetravalent 52 splice variants 52 proteomic analyzes 52 RT qPCR 52 RNA ribonucleic acid 52 hypermethylated 52 supernatants 52 quinolone resistant 52 transcriptome analysis 52 zebrafish larvae 52 metazoans 52 fission yeast 52 hnRNP 52 #S ribosomal RNA 52 S. enterica 51 bilayers 51 lymphangiogenesis 51 recombinants 51 cells transfected 51 methylation patterns 51 transcriptomic 51 differentially regulated 51 MEFs 51 aminopeptidase 51 lacZ 51 clades 51 heterozygotes 51 cDNAs 51 Saccharomyces 51 immunofluorescence 51 Epitope 51 Phylogenetic analyzes 51 distinct lineages 51 metazoan 51 adenoviral 51 immunotoxin 51 phenotyping 51 short hairpin RNAs 51 PRNP 51 Trypanosoma brucei 51 Pseudomonas syringae 51 noncoding RNAs 51 chloroplast genome 51 amino acid residue 51 bisulfite sequencing 51 #q#.# [002] 51 P falciparum 51 gametophyte 51 V3 loop 51 isoprenoid 51 Tribolium 51 RefSeq 51 enzymatically active 51 CpG island 51 V. cholerae 51 alternatively spliced 51 isogenic 51 eukaryote 51 phylogenetic analysis 51 non coding RNA 51 subcellular 51 trypanosome 51 linkage disequilibrium 51 EGFP 51 rRNA genes 51 gDNA 51 prokaryotic 51 viral genomes 51 ciliated 51 Prevotella 51 indels 51 RNA genome 51 NS5B 51 p# antigen 51 cynomolgus macaques 51 proteinase 50 reinhardtii 50 MDCK cells 50 Agrobacterium 50 frameshift mutation 50 MLL2 50 Streptomyces 50 S RNase 50 expressing GFP 50 X. laevis 50 deacetylase 50 cotransporter 50 mycoides 50 eukaryotic 50 C#BL 6 mice 50 ribonucleic acids 50 Mycobacterium 50 embryoid body 50 prokaryote 50 enolase 50 viral nucleic acids 50 genes encoding 50 androgen dependent 50 Monocytes 50 androgen receptor gene 50 DNA rearrangements 50 Prochlorococcus 50 inbred strains 50 quantitative PCR qPCR 50 maize genome 50 noncoding RNA 50 Mammalian 50 F. tularensis 50 kilobases 50 mononuclear 50 mitochondrial genomes 50 nucleoprotein 50 melanocytic nevi 50 siRNA sequences 50 oligo 50 amino acid residues 50 hematopoietic progenitors 50 Viral RNA 50 nonpathogenic 50 Anopheles gambiae 50 homogenates 50 Drosophila melanogaster 50 fungal genomes 50 germline cells 50 ncRNAs 50 reverse transcriptase RT 50 Peyer patches 50 phylogenetically 50 Sequenced 50 recombinant protein expression 50 Typhi 50 haplotyping 50 bone morphogenic protein 50 ras gene 50 morphologically 50 SSR markers 50 serine threonine kinase 50 epigenetic modification 49 Confocal microscopy 49 #degreesC 49 Xenopus 49 C1q 49 coiled coil 49 DNA polymerases 49 Biosynthesis 49 malaria parasite genome 49 Illumina genotyping 49 cytosine methylation 49 SCN5A 49 hybridomas 49 orthologous genes 49 ribosomal RNA 49 A. gambiae 49 ZEBOV 49 directed mutagenesis 49 quantitative RT PCR 49 Mendelian 49 peptide sequences 49 bacterium Escherichia coli 49 haplotypes 49 chromosomal deletions 49 passaging 49 amplicons 49 stably transfected 49 genetic recombination 49 MALAT1 49 BMAL1 49 Deinococcus 49 mRNA expression 49 kinase signaling 49 prokaryotic cells 49 introgression 49 histone H4 49 peroxidase 49 DNA deoxyribonucleic acid 49 endospores 49 comparative genomic analysis 49 transgene expression 49 cytochrome 49 micro RNA 49 mRNA sequences 49 transcriptional regulator 49 antibody secreting cells 49 syngeneic 49 paralogs 49 melanocyte 49 extracellular domains 49 Arabidopsis thaliana 49 tetramers 49 chick embryos 49 metagenomes 49 Fig. 2A 49 microarray datasets 49 transcriptomes 49 bovine serum albumin 49 arabidopsis 49 Single Nucleotide Polymorphism 49 intraperitoneal injection 49 affinity purification 49 Vps# 49 soluble proteins 49 HLA alleles 49 microsatellite loci 49 tRNA genes 49 transcriptome profiling 49 ChIP seq 49 histone modification 49 amplicon 49 nucleotide sequence 49 gel electrophoresis 49 prion strains 49 Saccharomyces cerevisiae 49 PIK3CA 49 combinatorial libraries 49 staphylococci 49 splice junctions 49 quantitative PCR 49 ant genomes 49 genomic sequences 49 uncharacterized 49 Oocyte 49 S. typhimurium 48 phylogenies 48 UTRs 48 Single Nucleotide Polymorphisms SNPs 48 gag pol 48 mtDNA sequences 48 noncoding regions 48 acetylated 48 LRRK2 gene 48 yeast Saccharomyces cerevisiae 48 paraffin embedded tissue 48 insertional 48 ENPP1 48 tumor infiltrating lymphocytes 48 gamma glutamyl 48 RNA sequences 48 chromatin immunoprecipitation ChIP 48 N acetyltransferase 48 HERV 48 S. pombe 48 genomic loci 48 protein isoforms 48 poly dA 48 replicative 48 lincRNAs 48 genome annotation 48 aCGH 48 hybridizations 48 homologous 48 H#K# [001] 48 Immunoglobulin 48 germline 48 constitutively active 48 VSV G 48 Sanger sequencing 48 clonal 48 eukaryotic genomes 48 stably expressing 48 microarray experiments 48 microRNA expression 48 CCL# 48 multigenic 48 isotype 48 mtDNA sequence 48 stilbene 48 antisera 48 contigs 48 microbial genomes 48 homologies 48 M. genitalium 48 HLA DR4 immune 48 DNase 48 Photosystem 48 Dulbecco 48 MC1R gene 48 PCR amplification 48 cultured neurons 48 pseudogenes 48 paraffin embedded 48 capsid proteins 48 B. subtilis 48 glycosylated 48 multiplex PCR 48 transcriptomics 48 HeLa cell 48 Enterobacter sakazakii 48 recombinantly 48 #S subunit 48 prion gene 48 Caenorhabditis 48 phorbol 48 centromeres 48 GABAergic interneurons 48 NF1 gene 48 abnormal cytology 48 CRISPR 48 agglutination 48 molecular phylogeny 47 C. neoformans 47 Rhizobium 47 drug metabolizing enzymes 47 CRP concentrations 47 recombinase 47 ribosomal subunit 47 Aspergillus oryzae 47 immunized mice 47 Entamoeba 47 differentially expressed 47 ChIP chip 47 HEK# 47 genotypic 47 metabolome 47 pseudogene 47 diploid genome 47 loci 47 macromolecule 47 microarray gene expression 47 anterior pituitary 47 guanine G 47 homozygotes 47 gene duplications 47 polymerase chain reactions 47 cell lysate 47 subfamilies 47 lentiviral 47 evolvability 47 piRNAs 47 evolutionary conserved 47 overexpressing 47 transcriptome 47 cDNA 47 massively parallel sequencing 47 somatostatin 47 embryonal carcinoma 47 homologous genes 47 reverse transcriptase protease 47 glycated 47 interrater 47 Experimentally 47 SINE 47 germinal centers 47 1α 47 chromosomal DNA 47 progressors 47 embryoid bodies 47 female gametophyte 47 Propionibacterium acnes 47 Arabidopsis 47 pyruvate kinase 47 pyrosequencing 47 genes encode 47 green alga Chlamydomonas 47 embryonic tissues 47 constitutively 47 microtiter 47 antigenically distinct 47 organism genome 47 noncoding DNA 47 hemoglobins 47 urease 47 neural progenitor cells 47 PCR primer 47 replikin 47 worm C. elegans 47 microscopic single celled 47 lysate 47 PCR primers 47 coding sequences 47 agar plates 47 lysed 47 NFTs 47 genomic proteomic 47 diploid 47 explants 47 μg ml 47 histone demethylase 47 Histoplasma capsulatum 47 amino acid sequences 47 integrated fluidic circuits IFCs 47 hydrogenase 47 metabolite concentrations 47 Pichia pastoris 46 Mycoplasma genitalium 46 coding genes 46 Scanning electron micrograph 46 metabolomic 46 bacterial chromosome 46 athymic mice 46 conserved sequences 46 dimorphic 46 mtDNA 46 mouse embryonic fibroblasts 46 mRNA molecules 46 HAR1 46 cDNA synthesis 46 subventricular zone 46 TT genotype 46 processive 46 non coding RNAs 46 splenocytes 46 amino acid sequence 46 primate genomes 46 apolipoproteins 46 hydroxyl OH 46 autosomes 46 follicular fluid 46 normal mammary epithelial 46 kilobase 46 Penicillium 46 proteomes 46 P. mirabilis 46 metagenome 46 transfected cells 46 detection reagents 46 sexually reproducing 46 homologous sequences 46 reassortant 46 HMPV 46 transduced 46 DLX5 46 silico prediction 46 incubations 46 phenotypic traits 46 miRBase 46 mutational 46 cefotaxime 46 lipopolysaccharide LPS 46 L alanine 46 FluChip 46 CpG islands 46 druggable targets 46 CTCF 46 keratinocyte 46 siRNA knockdown 46 Solexa sequencing 46 microbial genome 46 hybridoma 46 lipocalin 46 Sulfolobus 46 genomics transcriptomics 46 Karayiorgou 46 choroid plexus 46 GFP fluorescence 46 methylated 46 mutations 46 g mL 46 BALB c mice 46 multiprotein complex 46 UGT#A# * 46 primordia 46 5 hydroxymethylcytosine 46 codon 46 RGD peptide 46 transfected 46 Taq polymerase 46 protein subunits 46 yeast fungi 46 B. fragilis 46 chloroplast 46 Gene Ontology 46 kinome 46 Mycobacterium leprae 46 heritable traits 46 vitro maturation 46 chordate 46 hMSCs 46 RNA transcripts 45 basal cells 45 nutlin 3a 45 segmental duplications 45 Jurkat cells 45 Bifidobacterium infantis 45 genomic sequence 45 skin fibroblasts 45 nonoverlapping 45 N. benthamiana 45 Mycobacterium paratuberculosis 45 SNP arrays 45 passaged 45 tiny roundworm 45 insertions deletions 45 gene expression profiles 45 KCNQ1 45 nucleic 45 gene expression microarray 45 Neandertal DNA 45 bacterial enzymes 45 M. anisopliae 45 segmental duplication 45 amino acid alanine 45 fluorescently tagged 45 histone protein 45 mature oocytes 45 subfamily 45 meganuclease 45 M. paratuberculosis 45 inbred mouse 45 intron 45 plasmid DNA encoding 45 acetyl CoA 45 mRNA molecule 45 nucleotide 45 epigenomes 45 RNA polymerase II 45 amphioxus 45 genomic variation 45 single nucleotide polymorphism 45 meristem 45 shock proteins HSPs 45 Drosophila genome 45 yeast genome 45 genotypes 45 fibrous tangles 45 downregulated 45 cathepsins 45 translocations 45 mesoporous 45 WSN/# 45 interleukin 1ß 45 proteins encoded 45 K. pneumoniae 45 mouse testes 45 fermentative 45 Xenopus tropicalis 45 phi# 45 parthenogenic 45 spider silk gene 45 IN VITRO 45 HLA gene 45 kinesin motor 45 oocyst 45 Sanger Sequencing 45 genotypic resistance 45 Arabidopsis plants 45 genetic locus 45 haplotype 45 phylogenetic trees 45 chromatin immunoprecipitation 45 Escherichia coli bacteria 45 mouse embryonic fibroblast 45 nM 45 inferential statistics 45 Replikins 45 Mesenchymal 45 nucleotide bases 45 cellular organelles 45 monolayers 45 Volvox 45 RNA Seq 45 superantigen 45 phylogeny 45 recombinant proteins monoclonal antibodies 45 angiosperm 45 causes Chagas disease 45 Chlamydomonas 45 CD8 + 45 CD4 + CD8 + 45 proteins secreted 45 VHL gene 45 covalently bound 45 primordial germ cells 45 sequenced genome 45 genetic rearrangements 45 pluripotent embryonic 45 mononuclear cells 45 Cathepsin B 45 homologs 45 parthenogenetic 44 Segmental duplications 44 nitrogenase 44 shotgun sequencing 44 sonographic appearance 44 PKM2 44 physiologically relevant 44 gametocytes 44 Stat1 44 mammalian sperm 44 Rhesus Macaque 44 bioinformatic 44 subscale scores 44 microRNA molecule 44 ROC curves 44 haploid 44 codons 44 Aspergillus fumigatus 44 divide asymmetrically 44 RNA siRNA 44 genotyping gene expression 44 TERT 44 Tetrahymena 44 autism susceptibility genes 44 T. parva 44 umbilical vein 44 Hox gene 44 Febit 44 Sertoli cell 44 M. globosa 44 comparative genomic 44 cDNA sequencing 44 CHO cells 44 fungus Aspergillus 44 glioblastoma cells 44 BrdU 44 bone marrow mesenchymal stem 44 Agrobacterium tumefaciens 44 viral genome 44 comparative genomic hybridization CGH 44 p# deficient 44 odorant receptor 44 microarray analysis 44 cytolytic activity 44 myofibroblasts 44 nematode worms 44 mutant alleles 44 International HapMap Project 44 Deoxyribonucleic acid 44 roundworm C. elegans 44 cyanobacterial 44 polymorphonuclear 44 retroviral 44 mitochondrial genome sequence 44 exomes 44 genome decoded 44 exome 44 Proteomic 44 dermal papilla cells 44 albino rats 44 spider silk proteins 44 rhizosphere 44 helical structure 44 array CGH 44 methanogenic 44 RNA splicing 44 seminal vesicles 44 cRNA 44 antigen receptors 44 Microbial Genome 44 Chinese Hamster Ovary 44 pDCs 44 genomewide association study 44 Illumina HiSeq 44 trophoblast 44 lymphoblasts 44 sea urchin genome 44 endocytic pathway 44 vesicular 44 Archaea 44 sorting FACS 44 dbSNP 44 interactome 44 positional cloning 44 condensin II 44 antibody binds 44 DNA polymerase 44 supernatant 44 trophoblasts 44 genotyped 44 bacteria fungi protozoa 44 Illumina Genome Analyzer 44 methylated DNA 44 laser capture microdissection 44 replisome 44 mRNAs 44 stranded DNA ssDNA 44 Streptococcus salivarius 44 Hox genes 44 genotyping arrays 44 nineteen fifties 44 bivariate analyzes 44 Wnt protein 44 dI dV 44 Nature DOI #.#/nature# 44 HSCR 44 gene inactivation 44 phagosomes 44 1ß 44 morphogens 44 Heliconius 44 microbiomes 44 olfactory receptor 44 chimeric mouse 44 GenBank database 44 cocci 43 Neandertal genome 43 cDNA clone 43 viral proteins 43 furin 43 bacterial symbiont 43 ChR2 43 antigenic epitopes 43 mononuclear cell 43 thymine T 43 Sequencing Systems 43 intron exon 43 logistic regressions 43 kbp 43 cellulases 43 siRNAs targeting 43 viral capsid 43 gastrulation 43 gene expression patterns 43 nucleated 43 Fragile X mental retardation 43 rotifer 43 IL #p# 43 iTRAQ reagents 43 polymerases 43 artificial chromosomes 43 phylogenetic tree 43 ^ sup 43 mesenchyme 43 regulates gene expression 43 mammalian genomes 43 mammalian genome 43 Micromonas 43 oligonucleotide probes 43 ribozyme 43 moieties 43 Shrikant Mane 43 microfilariae 43 comparative genomics 43 CD#c 43 cotyledon 43 UCRs 43 TIR1 43 distantly related species 43 Illumina Solexa 43 mitochondrial genome 43 viral RNA 43 CGH array 43 syndromic 43 Medicago truncatula 43 horseradish peroxidase 43 cryo electron microscopy 43 chemically inactivated 43 miRNA molecules 43 KEGG 43 multipotent stem cells 43 proteome 43 Next Generation Sequencing NGS 43 B. anthracis 43 mesenchymal stem cell 43 chromosomal 43 lymphocyte subsets 43 intraperitoneally 43 Yamanaka recipe 43 keratinocytes 43 enterotypes 43 trans Golgi network 43 Amborella 43 nucleotide variations 43 gene expression assays 43 Symplex 43 VeraCode 43 transposable elements 43 gene expression 43 array comparative genomic 43 Mycoplasma mycoides 43 mucins 43 genetically sequenced 43 haplotype map 43 viroid 43 transgenic zebrafish 42 enzyme inhibition 42 mutant mouse 42 mesenteric lymph nodes 42 microdissected 42 hyphae 42 coated nanotubes 42 cDNA clones 42 planarian 42 CCL#L# 42 phylogenetic 42 organochlorine 42 biodegradable biocompatible 42 exons 42 mycobacteria 42 +#.# bps [002] 42 piggyBac 42 allergic airway inflammation 42 oligonucleotide ligation 42 Arabidopsis genes 42 vacuoles 42 embryonic germ 42 electrocorticography 42 kinase enzyme 42 nucleated cells 42 recombinant spider silk 42 HLA genes 42 bovine genome 42 infected macrophages 42 vitro maturation IVM 42 chromosome rearrangements 42 ovule 42 spore forming 42 human microbiome 42 genetically attenuated 42 ribosomal RNA genes 42 mouse mammary 42 GH IGF 42 buffy coat 42 covalently attached 42 isozymes 42 intraabdominal 42 metagenomic 42 hyperintensity 42 flagellar 42 bacteria archaea 42 inhibits VEGF 42 DNA nanoarrays 42 human ESCs 42 KSHV 42 male Wistar rats 42 zona pellucida 42 experimentally infected 42 Jeremy Schmutz 42 phenotypes 42 chimp genomes 42 NHGRI Large Scale 42 thermophilic 42 jawed vertebrates 42 bone marrow stromal cells 42 simian virus 42 bps 5s 42 Genbank 42 bacterial genome 42 egg follicles 42 paraventricular nucleus 42 underexpressed 42 lung fibroblasts 42 anionic backbone 42 multicellular organism 42 plant Arabidopsis 42 genome sequencer 42 dyads 42 pulse amplitude 42 TBC#D# 42 luteal cells 42 beta glucosidase 42 Chinese hamster ovary 42 GFP gene 42 cell culturing 41 electron micrographs 41 reassorted 41 matK 41 lipid nanoparticle 41 DICER1 gene 41 putrescine 41 triple helix 41 situ hybridisation FISH 41 synteny 41 mammalian cells 41 yeasts molds 41 purple sea urchin 41 concatenated