Related by context. All words. (Click for frequent words.) 64 sRNA 64 sequence homology 63 virulence genes 63 intergenic regions 62 metazoan 61 coding genes 61 glycolipids 61 ribonucleic acids 60 untranslated regions 60 genes encoding 60 Jhdm2a 60 ncRNAs 60 ncRNA 60 Alu elements 60 Wnt proteins 60 chromatin structure 60 mRNA molecules 60 non coding RNA 60 tRNA genes 59 orthologs 59 Or#b 59 pRb 59 noncoding RNAs 59 post translational modifications 59 soluble proteins 59 #S rRNA genes 59 gene rearrangements 59 coexpression 59 outer membrane proteins 59 noncoding DNA 59 splice variants 59 homologies 59 orthologous 59 #S rRNA 59 3'UTR 59 epigenetic modification 59 CD1d 59 antigen receptors 58 #S rRNA gene 58 nucleotide sequence 58 primary cilia 58 eukaryote 58 prokaryote 58 microRNAs miRNAs 58 paralogs 58 sequenced genomes 58 viral genomes 58 biogenesis 58 ciliated 58 cis regulatory 58 mRNA transcripts 58 RNA sequences 58 var genes 58 T. brucei 58 TP# gene 58 DNMT1 58 enolase 58 BMAL1 58 mammalian genomes 58 KIAA# 58 KCNQ1 58 metabolic enzymes 58 Bt toxins 58 eukaryotic cells 58 ribosomal RNA 58 chromatin proteins 58 proline rich 58 spontaneous mutations 58 intergenic 58 CRISPR 58 rRNA 58 viral proteins 57 evolutionary conserved 57 peroxisome 57 CTCF 57 homologues 57 RUNX3 57 miRNA expression 57 protist 57 sea urchin genome 57 anti microbial peptides 57 evolutionarily conserved 57 micro RNAs 57 mitochondrial gene 57 chromosomal DNA 57 subfamilies 57 nucleotide sequences 57 ribosomal proteins 57 acetylation 57 histone modifications 57 axon guidance 57 synthases 57 gene duplications 57 5 hydroxymethylcytosine 57 serine threonine 57 cellular organelles 57 nucleases 57 translocates 57 transcriptomes 57 epigenetic modifications 57 Htt 57 peptide fragments 57 #q#.# [002] 57 unicellular organisms 57 LIS1 57 histone demethylase 57 operons 57 Phytophthora species 57 prion strains 57 isotypes 57 genotoxic stress 57 microRNA molecules 57 coding sequences 57 epithelial tissues 57 constitutively expressed 57 short hairpin RNAs 57 coding exons 57 PIP2 57 MiRNAs 57 heterochromatin 57 noncoding 56 isoforms 56 Hsp# [001] 56 intronic 56 genome encodes 56 subcellular compartments 56 posttranslational modifications 56 mycoplasmas 56 Drosophila genome 56 cellulases 56 apoE 56 microRNA molecule 56 secreted proteins 56 cDNAs 56 Deinococcus 56 serine protease 56 cypin 56 telomere DNA 56 uPAR 56 membrane protein 56 morphogen 56 ribosomal DNA 56 carboxy terminal 56 alternatively spliced 56 thrombospondin 56 lincRNAs 56 splice junctions 56 epigenetic regulation 56 mammalian organisms 56 nucleoli 56 hypermethylated 56 fungal genomes 56 DNA methyltransferases 56 isoprenoid 56 cell nuclei 56 substrate specificity 56 somatic mutations 56 transcriptional regulation 56 ribonucleic acid RNA 56 proteins encoded 56 transgene expression 56 RNA binding 56 A. gambiae 56 Hox genes 56 Argonaute proteins 56 MAPK pathway 56 GLUT1 56 uncharacterized 56 S. cerevisiae 56 histone H4 56 primate genomes 56 carboxyl terminal 56 heterochromatic 56 small RNAs 56 Dicer enzyme 56 potent inhibitors 56 amyloid beta peptides 56 germline cells 56 eukaryotic 56 degrading enzymes 56 endonuclease 56 miR #b [002] 56 methylation patterns 56 nucleotide substitutions 56 conserved sequences 56 ERK2 55 yeast genome 55 mitochondrial proteins 55 coding RNA 55 haemagglutinin 55 archaeal 55 amino acid residues 55 missense mutations 55 experimentally validated 55 C. jejuni 55 gene sequences 55 ortholog 55 APOBEC3G 55 GPI anchored 55 differentially regulated 55 amino acid sequences 55 glycan 55 bilaterians 55 prokaryotic cells 55 introns 55 C. neoformans 55 AMPA receptors 55 cohesin 55 eukaryotic organisms 55 Olig2 55 Prochlorococcus 55 pseudogene 55 antigenic epitopes 55 M. pneumoniae 55 polyploid 55 QTLs 55 FOXO3a 55 telomeric 55 TAp# 55 Signal transduction 55 tRNA synthetases 55 beta globin 55 acetyl CoA 55 HPRT gene 55 haploid 55 catenin 55 SIRT3 55 Notch1 55 mitochondrial genes 55 lysine residues 55 cysteines 55 transcriptional machinery 55 cyclic AMP cAMP 55 miRNAs 55 neuroligins 55 IgG4 55 4E BP1 55 RNA polymerases 55 miRNA genes 55 piRNAs 55 vacuolar 55 amyloid fibrils 55 cytoplasmic tail 55 chromosomal regions 55 neuroepithelial cells 55 Rickettsia 55 ant genomes 55 Drosha 55 deacetylation 55 At#g# 55 glycosylated 55 eukaryotic cell 55 ChIP seq 55 deletion mutant 55 amino acid sequence 55 CpG islands 55 TRIM5 55 clades 55 histone modification 55 riboswitches 55 MT1 MMP 55 Candida species 54 ribosomal RNA rRNA 54 ciliates 54 DNA gyrase 54 miR# 54 replikin 54 polypeptide chain 54 paraffin embedded tissue 54 metagenomes 54 chloroplast genome 54 defensins 54 maternally inherited 54 homologous genes 54 CSHL scientists 54 regulates gene expression 54 heterodimers 54 bacterial genomes 54 Transcription factors 54 DNA demethylation 54 enterotypes 54 mutated protein 54 chromosomal translocations 54 prokaryotes 54 pseudogenes 54 digest cellulose 54 proteins 54 odorant receptor 54 transmembrane proteins 54 proteolytic enzymes 54 abnormal prions 54 HOTAIR 54 succinate dehydrogenase 54 micro RNA 54 evolutionary lineage 54 LRRK2 gene 54 microdeletion 54 IKKß 54 Sp1 54 glycoproteins 54 forkhead 54 recombination hotspots 54 Supplementary Fig 54 glycolytic 54 transduce 54 catalytically active 54 phenotypic differences 54 dephosphorylation 54 Klf4 54 encode proteins 54 evolutionary relatedness 54 genetic loci 54 Akt1 54 Apobec3 54 tyrosine phosphorylation 54 cellular pathways 54 chloroplast 54 eukaryotic genomes 54 #S rDNA 54 demethylase 54 dsRNA 54 amyloid peptides 54 OCT4 54 mutant worms 54 cnidarians 54 granule cells 54 immunoglobulin genes 54 abnormal prion protein 54 polymerases 54 somatic mutation 54 Fig. 1A 54 tRNAs 54 keratins 54 Prevotella 54 polynucleotides 54 polypeptides 54 interconversion 54 genomic loci 54 polynucleotide 54 centrioles 54 plastid 54 protein encoded 54 D. melanogaster 54 efflux pumps 54 Xenopus 54 ERK1 54 protists 54 oligomeric 54 Bacteroides 54 ERK signaling 54 membrane fusion 54 rDNA 54 hemagglutinin HA 54 segmental duplications 54 centromeres 54 trypanosome 54 proteins secreted 54 intron 54 hypermethylation 54 olfactory receptors 54 transcriptional regulator 54 immunodominant 54 NFKBIA 54 effector molecules 54 gamete formation 54 binding proteins 54 Xenopus laevis 54 mitochondrial genomes 54 PTPN# 54 fibronectin 54 ATP synthase 54 #S subunit 54 methyltransferase 54 connexin 54 mutant strains 54 RecA 54 alpha synuclein gene 54 PCR amplified 54 HipA 54 luminal cells 54 mutations 54 poly dA 54 Entamoeba 53 allelic variation 53 major histocompatibility complex 53 covalently bound 53 matrix metalloproteinases 53 HLA molecules 53 #BP# 53 protein tyrosine phosphatase 53 metabolomic profiles 53 FGFs 53 F actin 53 anionic backbone 53 protein conformation 53 transgenic mice expressing 53 single celled yeast 53 inactive X chromosome 53 5 hmC 53 Srs2 53 amyloid fibers 53 μ opioid receptor 53 prion infection 53 viral genome 53 hemolymph 53 coiled coil 53 multigenic 53 protein subunits 53 protein kinases 53 transmembrane domain 53 bacterium Escherichia coli 53 JAK STAT 53 zebrafish genome 53 T rubrum 53 mtDNA mutations 53 Rap1 53 Arabidopsis genome 53 Cx# [001] 53 fascin 53 downregulate 53 PTEN gene 53 homodimers 53 mammalian fatty acid 53 Genetic variation 53 FGF signaling 53 tumor suppressor protein 53 prokaryotic 53 beta globin gene 53 MIF protein 53 acetylated 53 effector protein 53 trans splicing 53 orthologous genes 53 epigenomic 53 Sertoli cell 53 Oct4 53 methylated DNA 53 PKD1 53 monomeric 53 proto oncogene 53 blastomeres 53 fig. S1 53 downregulated 53 Nup# 53 dermal papilla cells 53 KRAS oncogene 53 topoisomerases 53 selenoproteins 53 segmental duplication 53 Hair follicles 53 amplicons 53 L. pneumophila 53 tiny roundworm 53 subcellular localization 53 endosymbiont 53 polyadenylation 53 PGCs 53 RRM1 53 DNA polymerases 53 genomic alterations 53 histocompatibility 53 bile acid 53 homologs 53 MEFs 53 enzymatic activity 53 telomeric DNA 53 Shp2 53 NF1 gene 53 NS5B 53 Fragile X mental retardation 53 myosin VI 53 angiosperm 53 fibril 53 gene deletions 53 Eukaryotes 53 epigenetic markers 53 PIK3CA 53 tetramers 53 biosynthesis 53 cytosolic 53 siRNA knockdown 53 transmembrane protein 53 antisense strand 53 Fibroblasts 53 phenotypic variation 53 symbiont 53 epigenetic mechanisms 53 replisome 53 Math1 53 cytoskeletal proteins 53 subfamily 53 receptor molecule 53 subventricular zone 53 tRNA synthetase 53 filoviruses 53 exosome 53 phylogenetic analysis 53 histone protein 53 mitochondrial DNA mtDNA 53 lysates 53 clonally 53 induce pluripotency 53 PrPSc 53 sexually dimorphic 53 miRNA sequences 53 2' O methyl 53 epigenetic silencing 53 SIRT2 53 yeast Saccharomyces cerevisiae 53 NS5A 53 quantitative trait loci 53 germline mutations 53 Sanger sequencing 53 TIR1 53 post transcriptional 53 CYP#D# gene 53 EAAT2 53 V3 loop 53 mouse testes 53 isotype 53 homeobox gene 53 florigen 53 KLF4 53 esterase 53 membrane proximal 53 punctate 53 mutated EGFR 53 ribosomal genes 53 secretory cells 53 polyploids 53 CHD7 53 totipotent 53 intracellular signal transduction 53 transcriptional coactivator 53 centromere 53 differentially expressed 52 microcephalin 52 modifier genes 52 outcrossing 52 dermal papilla 52 actin binding 52 body louse genome 52 genetic recombination 52 bdelloids 52 siderophore 52 somites 52 loxP 52 primordial germ cells 52 antisense RNA 52 cytokinesis 52 trimers 52 cDNA libraries 52 Sox9 52 imprinted genes 52 MMP# 52 proteomes 52 prion gene 52 VHL gene 52 amino terminal 52 transferase 52 chromosome rearrangements 52 amyloidogenic 52 spatially distinct 52 vascular endothelial cells 52 X. laevis 52 noncoding RNA 52 transcriptional activation 52 globin genes 52 cytochrome b 52 capsid proteins 52 ligand receptor 52 mutant alleles 52 hemagglutinin H 52 SCN5A 52 thermophilum 52 transcriptionally active 52 organismal 52 introgression 52 evolvability 52 hexamers 52 Western blotting 52 plectasin 52 hydrolyze 52 aquaporins 52 macromolecule 52 BCL2 52 vertebrate genomes 52 Streptomyces 52 phylogenies 52 #S ribosomal RNA 52 unnatural amino acids 52 β galactosidase 52 Hox gene 52 trimeric 52 prodynorphin 52 regulating gene expression 52 enzyme AMPK 52 gambiae 52 neuronal pathways 52 endosymbiosis 52 transcription factors 52 hyphae 52 chordates 52 transduction 52 redox reactions 52 odorant receptors 52 phenotypic traits 52 hypervariable 52 peptide sequences 52 endogenous retroviruses 52 PPARγ 52 DLC1 52 genotypic 52 epitopes 52 vimentin 52 mitochondrial DNA mutations 52 Foxp3 52 Arabidopsis genes 52 UTRs 52 prion proteins 52 myofibroblasts 52 erythrocytes 52 J. Cell Biol 52 planarians 52 epigenetic alterations 52 A. thaliana 52 viral isolates 52 Tregs 52 SIR2 52 Caenorhabditis 52 mammalian 52 DLX5 52 Sox2 52 Wnts 52 senescent cells 52 evolutionary lineages 52 mouse embryonic fibroblasts 52 OGG1 52 epigenetic inheritance 52 PCV1 52 mutant proteins 52 Tetrahymena 52 phenotypes 52 MHC molecules 52 microdeletions 52 frameshift mutation 52 Leydig cells 52 phylogenetic trees 52 serotonin transporters 52 kinesin motor 52 DNA methylation patterns 52 genomic sequence 52 genes encode 52 HLA genes 52 hemoglobins 52 metazoans 52 loci 52 transiently transfected 52 ultraconserved 52 monocots 52 nitrogenase 52 overactivated 52 SOCS3 52 RNA viruses 52 H#K#me# 52 amino acid alanine 52 S. pombe 52 lymphoid cells 52 SGK1 52 deuterostomes 52 glycosylase 52 genotyping arrays 52 fig. S2 52 antisense molecules 52 protease enzyme 52 trophoblasts 52 transmembrane 52 nucleic 52 C. elegans 52 reproductively isolated 52 centromeric 52 polyploidy 52 miRNA molecules 52 small RNAs encoded 52 causal variants 52 chromosomal aberrations 52 microRNAs 52 antigen binding 52 chromatin immunoprecipitation ChIP 52 PAX5 52 commensal bacteria 52 MLL gene 52 replicative 52 extracellular proteins 52 Pollen grains 52 X inactivation 52 hematopoietic cells 52 operon 52 ORFs 51 receptor proteins 51 inbred strains 51 myopathies 51 tyrannosaurids 51 CRISPR Cas 51 amino acid histidine 51 uracil 51 mesodermal 51 nucleolar 51 serine threonine kinase 51 gene expression patterns 51 STAT1 51 vertebrate evolution 51 B lymphocyte 51 centrosomes 51 chordate 51 P. reichenowi 51 Ago2 51 unmethylated 51 RNA polymerase II 51 Phytophthora sojae 51 H#K# [001] 51 Histones 51 vitellogenin 51 tumor suppressors 51 mutagenesis 51 short hairpin RNA 51 differential gene expression 51 laforin 51 indels 51 caveolae 51 viral capsid 51 kilobase 51 gene amplification 51 HFE gene 51 HCMV 51 enzymatically active 51 physicochemical properties 51 pathogenic mutations 51 mouse fibroblasts 51 mouse mammary 51 adipogenic 51 neurons astrocytes 51 C3 convertase 51 morphologic 51 lymphoid 51 hippocampal neurons 51 endospores 51 normal prion protein 51 superfamily 51 fibril formation 51 splice variant 51 peptide receptor 51 nucleoprotein 51 DNA sequences 51 M. genitalium 51 gp# [002] 51 Phylogenetic 51 microRNA expression 51 Leishmania parasites 51 mRNA expression 51 choanoflagellates 51 suppressor gene 51 oligonucleotide probes 51 ribozyme 51 ZEBOV 51 glycosylation 51 CD8 T cells 51 denaturing gradient gel electrophoresis 51 unicellular organism 51 mRNA sequences 51 subcellular 51 T. gondii 51 transcriptional repressor 51 Fig. 3a 51 Transcriptome 51 worm Caenorhabditis elegans 51 lincRNA 51 autism susceptibility genes 51 experimentally infected 51 assay detects 51 retrotransposon 51 Segmental duplications 51 overexpressing 51 multicellular organisms 51 retinal neurons 51 olfactory receptor 51 HLA DQ2 51 PGC 1α 51 mutant p# 51 neuroblasts 51 messenger RNAs mRNAs 51 epidermal cells 51 coevolution 51 non coding RNAs 51 photosynthetic apparatus 51 UGT#B# 51 alternative splicing 51 hexamer 51 peptide ligands 51 secretase 51 somatic stem cells 51 Neanderthal fossils 51 radial glia 51 fruitfly Drosophila 51 embryonic tissues 51 dynamical processes 51 Proteobacteria 51 DEAR1 51 cell lysates 51 trinucleotide 51 mouse ESCs 51 bacteria archaea 51 STAT4 51 Aspergillus nidulans 51 interfering RNA 51 protein fragment 51 Archaea 51 multigene 51 Hepatocytes 51 RNA transcripts 51 observable traits 51 valine 51 histone 51 HLAs 51 CD#c 51 ubiquitylation 51 mice lacking 51 metabolizing enzymes 51 collagenous 51 MLH1 51 extracellular domains 51 germline stem cells 51 neuronal synapses 51 transcriptomics 51 Leptospira 51 tiny tubules 51 IMPDH 51 constitutively active 51 glycan structures 51 resorb 51 noncoding regions 51 oligos 51 pea aphid 51 Chromosomal 51 dimorphic 51 malaria parasite genome 51 multi celled 51 thale cress 51 human ESCs 51 Cre recombinase 51 morphogenetic 51 lipid molecules 51 cellulase 51 polyamine 51 nucleic acid molecules 51 indel 51 H2AX 51 RNAs 51 Candidatus 51 Phylogenetic analysis 51 chromatin modification 51 phenotypic variability 51 skin fibroblasts 51 phytochrome 51 transduced 51 morphologically 51 pyrethroid resistant 51 bacterial symbiont 51 genetic determinants 51 hypothalamic neurons 51 progranulin gene 51 disulfide bonds 51 Fig. 1D 51 cytosine methylation 51 recombinantly 51 dNTP 51 aggrecan 51 TEP1 51 genomic instability 51 HepG2 cells 51 genomic DNA 51 human leukocyte antigens 51 artiodactyls 51 cysteine protease 51 linkage disequilibrium 51 Lactic acid bacteria 51 biochemical assays 51 immunoadhesins 51 Plasmodium 51 beta galactosidase 51 nucleotide variations 51 transgene 51 amphioxus 51 RQ PCR 51 chromatin immunoprecipitation 51 keratinocyte 51 lectin 51 mitotic spindles 51 tensin homolog 51 ARID1A 51 umbilical vein 51 Fig. 2b 51 antibody antigen 51 postsynaptic 51 ChR2 51 Eg5 51 EBNA1 51 lamellae 51 HIP1 51 meristem 51 miRNA 51 phage 51 clefting 51 heritable traits 51 phosphorylated proteins 50 unspecialized cells 50 selfing 50 peptides 50 Fig. 1a 50 rootlets 50 TBC#D# 50 multipotent stem cells 50 multipotent cells 50 ontogeny 50 multinucleated 50 Volvox 50 6S RNA 50 recombinations 50 antibodies bind 50 secretory 50 moss Physcomitrella patens 50 cyclin E 50 molecular biomarkers 50 chromosome #q# [001] 50 gene expression 50 RNA fragments 50 transcriptome 50 messenger RNA mRNA 50 parthenogenetic 50 terrestrial vertebrates 50 proteomic analysis 50 Chlamydomonas 50 recombinant antibody 50 PKM2 50 genomic deletions 50 xylan 50 proteases 50 Langerhans cells 50 ploidy 50 fluorescently tagged 50 CHD5 50 SMN protein 50 trophoblast 50 Immunohistochemical staining 50 FMR1 gene 50 chemically modify 50 DNA transposons 50 functional polymorphism 50 BRAF V#E 50 NR#A# gene 50 germline 50 RNA extraction 50 female gametophyte 50 fluorescent molecules 50 oviraptors 50 parasitoid 50 regulate gene expression 50 Yamanaka recipe 50 kinome 50 chick embryos 50 RNA molecules 50 Comparative genomics 50 causative mutations 50 mammalian tissues 50 bioactivity 50 desmosomes 50 cDNA clone 50 RNA splicing 50 Typhi 50 reticulum 50 differentially expressed genes 50 planktonic foraminifera 50 homologous sequences 50 genetic alterations 50 worm C. elegans 50 HDACs 50 neuraminidase NA 50 telomerase RNA 50 Trypanosoma brucei 50 basal cells 50 proteome 50 Smac mimic 50 euchromatin 50 Runx1 50 GenBank accession 50 double helix molecular 50 P. patens 50 phylogenetic analyzes 50 spicule